KEGG   Shinella zoogloeoides: K8M09_12200
Entry
K8M09_12200       CDS       T07727                                 
Name
(GenBank) TrbI/VirB10 family protein
  KO
K20533  type IV secretion system protein TrbI
Organism
szo  Shinella zoogloeoides
Pathway
szo02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:szo00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    K8M09_12200
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:szo02044]
    K8M09_12200
Secretion system [BR:szo02044]
 Type IV secretion system
  Trb secretion system protein
   K8M09_12200
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: UEX80378
LinkDB
Position
complement(2444293..2445432)
AA seq 379 aa
MTDTESNAAPMRLRAEAPRVTRLSRKMLASVAAVALVGIGGALIYALQTRGPGDGGEELY
STANRQPADGLAGLPRDYTGPILGPALPGDLGGPILSAQNAGQPVVPPVVQTPGVDEAEQ
RRRAEEEAARLSTVFFQSRQGSTAATSGTMPGLAGFDPASATGQPTAQDKQLAFLNAAAD
RRTVTPDRVTPPASPFVLQAGAVISAALITGIRSDLPGQITAQVTENIYDSPTGSILLVP
QGTRLIGQYDNAVQFGQRRVLLVWNRLIMPNGRSIVLERQPGADTQGYAGLEDGVDYHWW
DLAKAAALSTLLGVGAELATDDNDRLIRAIRDGAQDTVNQAGQQIVQRQLQVAPTLTIRP
GFPVRVIVTKDLVLEPYRS
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgaccgataccgaatccaatgcagctcccatgcgcctgcgcgccgaagccccacgagtc
acgcgcctgtcacgcaagatgctggccagcgtcgcggccgtcgccctggtcgggatcggt
ggcgcgctgatctatgcacttcagacgcgcggtcccggcgatggcggcgaggagctttat
tccaccgccaaccgtcagcccgccgatggcctcgccggcctgccgcgcgactataccggc
ccgatcctcggtcccgcgctacccggcgatctcggcggcccgatcctgtccgcgcagaat
gccggccagcccgtcgtgccgcccgtcgttcagacgcccggcgtcgatgaggccgaacag
cgtcgccgcgccgaggaagaggccgcccgcctcagcaccgtgttcttccagtcccggcag
ggctcgacggcggcgacttccggcacgatgccgggccttgccggtttcgatcccgccagc
gcgacgggacagccgaccgcgcaggacaagcagcttgctttcctcaatgcggcggccgac
cggcgcaccgtcacgccggatcgtgtcacgcctccggcatcgcccttcgtgcttcaggcc
ggcgcggtcatctcggccgcgctcatcaccggcatccgttccgatcttcccggccagatc
acggcgcaggtcacggagaacatctatgacagcccgacggggagcattctactcgtaccg
cagggaacccgcctcatcggtcagtatgacaatgccgtgcagttcggccagcgccgcgtt
ctgctcgtttggaatcgactcatcatgccgaacggccgctccatcgttcttgagcgccag
cccggcgcggatacgcagggctatgccggcctggaggatggcgtcgattaccactggtgg
gatctcgccaaggccgccgcactctcgaccttgctcggcgttggcgccgaactcgccacc
gatgacaacgatcgcctgatccgcgccatccgtgacggtgcgcaggatacggtcaatcag
gccggtcagcagatcgtccagcgccagttgcaggtcgcaccgaccctgaccatccggccc
ggtttccccgtccgcgtcatcgtcaccaaggatttggtgctcgaaccctacaggagctga

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