KEGG   Shinella zoogloeoides: K8M09_12210
Entry
K8M09_12210       CDS       T07727                                 
Name
(GenBank) conjugal transfer protein TrbF
  KO
K20531  type IV secretion system protein TrbF
Organism
szo  Shinella zoogloeoides
Pathway
szo02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:szo00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    K8M09_12210
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:szo02044]
    K8M09_12210
Secretion system [BR:szo02044]
 Type IV secretion system
  Trb secretion system protein
   K8M09_12210
SSDB
Motif
Pfam: VirB8 PTR2
Other DBs
NCBI-ProteinID: UEX80380
LinkDB
Position
complement(2446385..2447074)
AA seq 229 aa
MNLFKRPAAHYGKTPQPETPYQRAAQVWDERIGSARVQAKNWRIMAFGSLFLSAGFAAAL
VIQSARGTVVPWVVQVDNLGHSQAVAPATADYRPTDPQIAWHLARFIEQVRSIPADPVIV
RQNWLRAYEWTTDRGAGALNDYARANDPFAKVGKQQIAVEVSSVIRASPDSFRVAWSERR
YEDGKLATTERWTAILTIALQPPRDAERLKANPLGIYVNAINWSREMDQ
NT seq 690 nt   +upstreamnt  +downstreamnt
atgaacctcttcaaacgacccgctgcccattacggcaagacaccgcaacccgagacgccc
tatcaacgcgccgcgcaggtctgggacgagcgtatcggctcggcccgcgtgcaggcgaag
aactggcgcatcatggccttcggctcgctattcctctcggctggcttcgccgccgcgctc
gtcattcagtcggcgcgtgggaccgtcgtgccctgggtcgtgcaggtcgacaatctcggc
cattcgcaggcagtggctccggcaaccgccgactatcggccgaccgatccgcagatcgcg
tggcatctcgcccgcttcatcgaacaggtacgctccatcccggccgatccggtcatcgtc
cgtcagaactggcttcgcgcctatgaatggacgaccgatcgcggcgcgggcgcactcaac
gactatgcccgcgccaacgatcccttcgccaaggtcggcaagcagcagatcgcggtcgag
gtttccagcgtcatccgcgcctcgccggattcgttccgcgtggcctggtccgaacggcgc
tacgaggatggcaagctcgccacgaccgaacgctggaccgccatcctgaccatcgcgctt
cagccgccccgagacgccgaacgcctcaaggccaatccgctcggcatctacgtcaatgcc
atcaactggtcgcgggagatggaccaatga

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