Thalassomonas actiniarum: SG35_023610
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Entry
SG35_023610 CDS
T08826
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tact
Thalassomonas actiniarum
Pathway
tact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SG35_023610 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tact03019
]
SG35_023610 (pcnB)
Enzymes [BR:
tact01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SG35_023610 (pcnB)
Messenger RNA biogenesis [BR:
tact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SG35_023610 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Fungal_trans
Motif
Other DBs
NCBI-ProteinID:
WDD98231
LinkDB
All DBs
Position
5420893..5422350
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AA seq
485 aa
AA seq
DB search
MRITLRSKIIKSVINLCKKVLGRKTNKTEKKTATFSSPVVLTRDQHPVSRKHISTNALKV
LYRLNKGGYDAYLVGGGVRDIILGLEPKDFDIATNATPEQIKELFRNCRLIGRRFRLAHI
VFGRDVIEVATFRGHHDNNQEKAKGNQKISKQSEHGMLLRDNIYGSIEEDAERRDFSINA
LYYSVTDFKVYDFANGVEDVHNRIIRLIGDPETRYREDPVRMLRAIRFATKLDMTISEET
QAPIAELAPLLANIPAARMFEEFNKLFLSGKARENFDMLRDYGLFKYFFPVVEQSLEQEE
NIHLNDFIRLALKNTDLRINNNQRVTPAFLLAAMLWYPLQARIQRLNAASQLTPQDAFFA
AYNELISEQQRSISIPKRFQLVMKDIWILQDKLARRDGKRAYKSFEHPKFRAGYDFLLLR
GEIEGGPAQELAKWWTDFQAAHPETQQQMIKAVAVNRPGARRSSRKRKKPGSQSANKASS
EKNSV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcgcataaccttgaggtcaaaaattatcaaaagcgtgattaatttgtgtaaaaaagtt
ctgggaagaaaaaccaacaaaacggaaaagaaaacagcaacattttccagcccggtagtt
ttaacacgtgatcaacacccggtttcccgaaaacatatcagcaccaatgctttaaaagta
ctgtatcgcttgaataaaggcggttacgacgcttatctggtgggcggcggcgtcagggat
attattttggggctagagccgaaagattttgatattgccaccaatgccaccccggagcag
attaaagagctgtttcgcaattgccgccttatcggccgccgctttcgtttagcccatatc
gtttttggccgcgatgtaatcgaagtcgccactttccgcggacaccatgacaacaaccag
gaaaaggccaaaggcaaccagaaaatctccaagcagagcgagcacggcatgctgctgcgc
gataatatttacggctcaattgaagaagacgccgagcgccgcgatttttccatcaatgcc
ctgtattactcggtcacagattttaaagtttatgattttgccaatggcgtcgaagacgtt
cataaccgtattatccgcctgatcggcgatcccgaaacccgttaccgcgaagacccggtg
cgcatgctcagggcgatccgttttgccactaagctggatatgaccatcagtgaagaaacc
caggcgcctatcgccgagttagccccgctgctggccaatattcccgccgccaggatgttt
gaagaattcaataaacttttcctgtccggtaaggcccgggaaaattttgatatgttaagg
gactacggcctgtttaaatatttcttccctgtggtagagcaaagccttgagcaggaagaa
aatatccatttaaacgatttcatccgcctggcgctgaaaaataccgatttgcgcatcaat
aacaaccaaagggttaccccggccttcttgctggcggccatgttatggtacccgctgcag
gcccgcatccagaggttaaatgccgccagtcagttaacgccgcaagatgccttttttgcc
gcctataacgagctgatctccgagcaacaacgcagcatttctatcccgaaacgcttccag
ctggtgatgaaagatatctggatcttacaggataaactggcgcgccgtgacggcaaacgc
gcctataaaagtttcgaacatccgaaattcagggccggctacgacttcctgttgctgcgc
ggcgagatagaaggcggaccggcacaggagctggccaagtggtggacagattttcaggcc
gctcacccggaaacccagcaacaaatgatcaaagcggttgcggttaaccgccccggcgcc
cgcagatccagccgcaagcggaaaaaacccggcagtcagagcgccaataaggcaagctct
gagaaaaacagtgtctga
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