Thermanaerovibrio acidaminovorans: Taci_1214
Help
Entry
Taci_1214 CDS
T01129
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tai
Thermanaerovibrio acidaminovorans
Pathway
tai03410
Base excision repair
tai03430
Mismatch repair
tai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Taci_1214
03430 Mismatch repair
Taci_1214
03440 Homologous recombination
Taci_1214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tai03400
]
Taci_1214
DNA repair and recombination proteins [BR:
tai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Taci_1214
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Taci_1214
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Taci_1214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ACZ19446
UniProt:
D1B605
LinkDB
All DBs
Position
complement(1263113..1264750)
Genome browser
AA seq
545 aa
AA seq
DB search
MMFCGIDEIDITPRRETPGGAMSQFLSAVAGIRGWGEEEFLSWLWADLQQELEAIPLAEP
EVRALQVISSVRPGERVIIYGDYDVDGLSATTLAMELMLARGAAVRYFIPHRFLEGYGFH
VNTARKIAARGCDLLLVVDCGTKDVEALEVIDQAGIPTVVFDHHTPGDGLPKGVLVNPHC
FDLPTPLTALCAAGVLWSWIWRSRIMDRSWTAARLDLACLATVADCMDLSVPLNRCIVKE
GLKLIRRSPRRGIGALLGRLGVEPQDVDEEVLSMKLIPCLNAPGRLDLAEEAVRLLYPGD
GSVEPLVDRVLSLNEERRRLSSVIMKDAQGDLDRHVYHGKDWPVGVLSSVASRLCNDRGR
PVALVAPAGDGLRGTLRIPNGAGDAVKILSRMSHMLSAFGGHRCAAGFSVQRHHWEAVRE
GLEAALRELPSDRCRLDVIHWPLDRIDQSMEEDLDALGPFGMGNPAPLLYHPGGFQVEPM
GRTGRVSKLLAQGREIVAFASPLELQGMEARGIVYRPKMEAWRGRRRLKLYLEKVVLSSG
EGVDR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatgttctgcggaatagacgagatagacatcaccccccgaagggagaccccagggggg
gcgatgtcgcagttcctatccgccgtggcggggatccggggctggggggaggaggagttc
ctatcgtggctctgggcggacctccagcaggagctggaggcgatcccgttggcggaaccg
gaggtccgggccctgcaggtcatatcatccgtgaggcccggggagcgggtcataatatac
ggggactacgacgtggacggactctccgccaccaccctggcgatggagctcatgctggcc
cggggggctgcggtgcgttacttcatcccccatcgcttcctggagggctacggcttccac
gtgaacaccgcccggaagatagccgcccgggggtgtgacctgctgctggtggtggactgc
ggcaccaaggacgtggaggccctggaggtcatagaccaggcggggatcccaacggtggtg
ttcgatcaccacaccccgggggatggtctacccaagggagtcctggtgaacccgcactgc
ttcgacctccccacccccctcacggccctctgcgccgccggggtcctctggtcatggata
tggcgaagccgaataatggacaggtcctggaccgccgcccggctggacctggcctgtctg
gccaccgtggcggactgcatggacctgtcggtgccgctcaaccggtgcatcgtcaaggag
ggcctcaaactgatccgccggagccccaggaggggcataggtgccctgctgggtaggctc
ggggtggagccccaggacgtggacgaggaggtcctctccatgaagctgatcccctgcctc
aacgccccgggcaggctggacctggcggaggaggcggtgaggctcctctatcccggggac
ggatcggtggagcccctggtggaccgggtgctgtccctgaacgaggagcggcgccgcctg
tcctccgtgataatgaaggacgcccagggggacctggaccggcacgtctaccacggcaag
gactggcccgtgggggtcctgagcagcgtggccagccggctctgcaacgaccggggccgc
ccggtggccctggtggcccccgcgggggatggccttaggggtacccttaggatccccaac
ggcgccggcgatgcggtgaagatattgagtcgcatgtcccacatgctaagcgccttcggt
ggacaccgctgcgccgctgggttctcggtgcagcgccaccattgggaggcggtcagagag
gggcttgaggctgcattgagggagctcccctccgaccggtgccggctggacgtgatccac
tggcccctggatcggatagaccagtccatggaggaggacctggacgccctgggccccttc
ggaatggggaacccggcgcccctcctgtatcaccccgggggcttccaggtggagcccatg
gggaggaccggccgggtcagcaagctgctggcccaggggagggagatagtggccttcgcc
tcccccctggagctccaggggatggaggccagggggatagtgtacaggcccaagatggag
gcctggcggggcaggcgccgactcaagctgtacctggagaaggtggtcctgtcctccggg
gagggggtggaccgttga
DBGET
integrated database retrieval system
