Taylorella asinigenitalis 14/45: KUM_1072
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Entry
KUM_1072 CDS
T02603
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
tat
Taylorella asinigenitalis 14/45
Pathway
tat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KUM_1072 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tat03400
]
KUM_1072 (uvrA)
DNA repair and recombination proteins [BR:
tat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KUM_1072 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KUM_1072 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_29
SMC_N
AAA_21
AAA_16
Viral_helicase1
nSTAND1
RsgA_GTPase
AAA_22
nSTAND3
AAA_18
UvrA_DNA-bind
NACHT
AAA_33
ATPase
AAA_23
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
CCG19857
UniProt:
I7JRW0
LinkDB
All DBs
Position
complement(1121492..1127050)
Genome browser
AA seq
1852 aa
AA seq
DB search
MTSKISIFGAKQNHLKNLDVQINTGEITVITGVSGSGKSSLAFDTLYAEGQRKYVETFSP
YARQFLDRMDKPQVERIEGILPAIAINQTNPVRNSRSSVGTMTELNDLIKLLYHHAGRLH
CRCCGRAVERFNAESIFKELANNVRNEDSKLVVTFAVKIPKNFTQEEIEQFLSQQGYGRI
QREQEPKGDDEEKTLFVIQDRFKLSRVAKSRVYEAIETASRFGNGKIFIFEMFSSEDGTD
YELIHPFSDQLRCDHCNITYSEVTPSHFSFNSPAGACETCRGFGRTMGIDYNLVIPDSNK
TLAKGAVKPFQTATGKECQRDLMKYASKAKVRTDVPWRDLSSAERAWVINGDPDFAFTAK
DWKNKWYGIAAFFKYLESRSYKMHVRVLLSKYRAYTKCHACMGSRLKPDSTLWRIGQQQS
SALKHYDRFMPIEAKWTQKQLNDMPGLCIHDLMRISIEDLEKFFEAETFDAPELKIVVDE
IKVRVRYLNRVGLSYLSLDRQSRTLSGGEVQRINLTTALGTSLTNTLFVLDEPSIGLHPH
DTNQIIDVMQGLKKSGNTLVVVEHDPQIMFSADRVLDMGPGPGERGGEIVFDGSPEELRS
SDSLTGKYLGNLLRVESPKPMKVLKNTPRLVLSGARTNNLKNLDVEFPLNRLVCVTGVSG
SGKSTLIQNVLYPAIMEYFNKPTSEAGEYDSLLGTEMISDVVMVDQSPIAKTTRSNPASH
VGAYDVIRKIFADTEIAKVRGYTTGTFSFNSGDGRCPTCQGTGYEYVEMQFLSDVYLKCP
DCNGSRFKPEILENYVEHLGRRANIADVLQMTVHEALEFFKGMREISSRLQPLVDVGLDY
LALGQPVPTLSGGESQRLKLAGHLVKASRSKTSSKGTLFLFDEPTTGLHFHDISKLMSAF
RKLLEAGHSIILIEHNLDVIRASDWIIDLGPGGGLNGGQIVAIGSPEDIQKNKSSLTGNA
LVQYEKSLAQKSPKALFDKSKNLKYKFESAPKEISIQNAYEHNLKNVSVKIPHNKFTVIT
GVSGSGKSTLAFDILFNEGQRRYLESLNAYARSFVQPASKPDVDAIYGIPPTVAIEQRTS
RGGRKSTVGTMTEIHHFLRLLYQKLGTQYCPTCDVPVEAFSKEQIEDMVWREFKNKNVSF
LATLVSKRKGYYTDLAKWAKKAGFETLRVDGVDTPVSPWPRLDRYIDHTIELPVFSGKLS
SKSVMNDALELAYEHGKGAFSVLNSKGEQKYFSTKRACPVCSSAFPEPDPRMFSYNSSQG
WCPDCMGTGLINEKEVDELENNESLELDIAQNADNGYLGFCRTCNGTRLNSIARAFRWKE
KSITEISQLSVDKASDFFAAIELDKREQTIGRDILREINSRLNFMQSVGLDYLSLDRSAP
TLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNRILLQSLKKLEGNGNTLVVVE
HDDDTIRSAEHIIDVGPGAGVRGGRIIAQGTYDDIVKNKNSVTGKYLADPLKHSFKSRIK
SESSTDMITMHSANLHNIKDIDVLVPVGCLTVVTGVSGSGKSTLARDILLTNVKEAIANQ
KSPKNIEWENVHHIDGWEKITRVLEVDQTPIGKTPRSCPATYVGFWDDIRKLFAQTTEAK
MRGWTASRFSFNTGKGRCLICEGQGMRTVEMNFLPDVKVQCEACNGMRFNSDTLQVKVRD
KSIGDILKMDIDEAVPFFENHPKVLRPLKLLQDVGLGYLTLGQPSPTLSGGEAQRIKLVS
ELVKARMDEGVTKTGRASVRAHTLYILDEPTVGLSMADVEKLIDVLHRLVDSSNTVVVIE
HNLDVMAEADWIIDMGPEGGDRGGKLVYSGTPSKMLRTKGHTARVLKELKRA
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaaaaatatcaattttcggtgccaaacaaaatcatttaaaaaatctcgacgtg
cagataaatacaggagaaatcaccgttattacgggtgtatctggatcggggaaaagctcc
ctcgcctttgatacattatacgcagaaggacagaggaagtatgtagagacattttcaccg
tatgcgaggcagtttttagatcgcatggataaaccacaggtggagcggattgaggggata
ttgccagcgattgctataaatcagacaaatccagtgcgaaattcgcgaagctctgttggg
actatgacagagctaaatgacttaatcaagcttttatatcatcatgctgggagattgcat
tgccgctgctgtgggcgagcagtagagcgatttaacgcagaatctatttttaaagagctt
gcaaataatgttcggaatgaagactcgaaattagtggttactttcgccgtaaaaattccc
aaaaattttactcaagaagaaatagagcaatttctatcccaacagggttatggtcgcatt
caacgagagcaagaacctaaaggcgatgatgaggagaagaccctttttgttattcaggat
cgtttcaaactctcgcgagttgcaaaatcgcgtgtttatgaggcgattgagacggcatca
cgttttggaaacggaaagatttttatattcgagatgttctcgagtgaggatggtacagac
tacgaattaatacatccctttagcgatcagttgcgctgcgaccattgcaatattacttac
tctgaagtgacaccttctcacttttcatttaattctcctgcaggtgcatgcgaaacttgt
cgcggctttggtcgcacgatgggcattgactataaccttgtaattcctgattccaataaa
actcttgcaaaaggtgctgttaagccattccaaaccgcaactggaaaagagtgtcagcgc
gaccttatgaaatatgcgtctaaggctaaagttcgcactgatgtgccatggagagattta
agctctgcagaacgagcatgggttataaatggcgaccccgactttgctttcacggcaaaa
gactggaaaaacaaatggtacggtattgccgcattttttaagtatcttgaatcgcgctct
tacaaaatgcatgtacgcgtattgctttcaaaatatagagcttacacaaaatgtcatgcc
tgcatgggctcacgccttaaacctgattcaactttatggcgtattggccaacagcaatcc
tccgccctaaaacattatgatcgatttatgcccattgaagctaagtggacgcaaaagcaa
ttgaatgatatgccaggactttgtattcatgaccttatgcgtatatcgattgaggatttg
gagaaattctttgaagccgagacttttgacgcacctgaacttaagatagttgtcgatgaa
attaaggttcgcgtgcggtatttaaatcgagtgggactttcatatctttcactagatcga
cagagtcgcacattgtcaggtggcgaagtgcaacgcataaaccttacaacagctcttggg
acatcccttacgaatacgctttttgtgctcgatgagccctccattggcctccatccacat
gatacaaatcaaattatagatgtaatgcaaggccttaaaaaaagtggcaatactctcgta
gtcgtcgaacatgaccctcaaatcatgttctctgctgatcgtgtgttggatatgggccct
ggtccaggcgaacgtggtggagagattgtattcgatggctctcctgaggaacttcgttca
tcagattctcttacaggaaaatatttaggtaatctgctgcgtgtagaatctccaaaaccg
atgaaggttctgaaaaacactccacgactggtccttagcggtgcaagaacaaataattta
aaaaatttagatgtggaattcccactaaatcgacttgtttgtgtgacaggtgtttcgggt
tcggggaaatctacattgattcaaaatgttctctatccagcaattatggagtatttcaat
aaacccacttctgaagctggagaatatgactcattactaggtacagagatgatttcggat
gtagtgatggtcgatcagtcgcccattgccaaaacaacgcgatctaatccagccagtcat
gttggtgcttacgatgttatacgcaaaatttttgctgatactgaaatcgctaaagtgcga
ggctatacaacaggcacatttagttttaatagtggtgatggtagatgcccaacttgccaa
gggacgggctatgaatatgttgagatgcagtttttgtcagatgtctatttaaaatgcccc
gactgcaatggctcgcgttttaaacctgagattcttgaaaattatgttgaacatttaggt
cggcgagcaaatatcgctgatgtgcttcaaatgactgtgcatgaggctcttgagttcttt
aagggcatgagagagataagctcacgccttcagccattggttgatgtagggcttgattat
ttggcccttggtcagcccgtaccaacgctttcgggcggtgaatctcaacgattaaaactt
gctggacatctagtaaaagcttctcgtagcaagactagttctaaaggcacattgttttta
ttcgatgaacctacaactgggctgcattttcatgatatttctaaattaatgtctgcgttt
cgcaagctacttgaagcgggtcactcgattatattgattgaacataatctcgatgtaatc
cgtgcttccgattggataatagatcttgggcctggtggcggactcaatggaggtcaaatt
gttgcaattggttcgcctgaagatatacaaaaaaacaaatcctctttaactggcaatgct
ctcgtacaatacgaaaagtctcttgctcaaaaatctcctaaagctttattcgataaatca
aaaaaccttaaatataaatttgaatctgcaccaaaagaaatttcgattcaaaacgcttat
gaacataatttgaaaaatgtgtcggtaaaaattccgcacaataaatttactgttatcact
ggggtttcaggttcaggaaaatcaactcttgctttcgatattctatttaatgagggtcaa
cgcaggtatctagagtctttaaacgcgtatgcacgctcgttcgtgcaacctgcaagcaag
cccgatgttgatgcaatatacggtatccctcctactgtagccatcgaacaaagaacaagc
cgaggtggcagaaaatccaccgtcggaactatgaccgaaatccatcacttcttgcgactt
ttatatcaaaaattaggaacgcagtattgtcctacctgcgatgttcctgtagaagccttt
agtaaagagcaaatcgaagatatggtttggcgagaatttaaaaacaaaaatgtcagcttt
cttgcaactttagtttctaaacgtaagggctactacactgaccttgcaaaatgggctaaa
aaagctggctttgaaacgctgagagttgatggagttgatacacctgtaagtccatggcca
agacttgatcgttatattgaccacacgattgagctcccagtatttagtggaaaattaagt
agcaagtcagttatgaatgatgctttagaacttgcctatgaacatggtaagggtgcgttt
agtgttttaaattccaaaggggagcaaaagtatttttcaaccaaacgtgcttgtcctgtg
tgtagtagtgcgtttccagaaccagatccacgcatgttctcctataactcctcacaaggt
tggtgtcctgattgtatgggcactggtttgataaatgaaaaagaagttgatgaattagag
aataatgaatctttagagttagatatagcacaaaatgcggataatggatatctcggattt
tgtcgaacatgtaatgggacaagactcaatagcattgccagagcatttagatggaaagag
aaatccataactgaaataagccaattatcagtagacaaggccagcgacttttttgctgca
atagaacttgataaacgagagcagacgattggccgcgatatccttcgagagataaattct
cgtcttaattttatgcagtccgtgggattggattatttgtcactggatcgttcggcaccg
acactatcgggcggagaggcccaacgcataaggctagcagctcagctggggtcaaatcta
caaggagtttgttatgttctagatgaaccaacgattggacttcacccgcgcgataatcgc
attcttttgcaatcacttaaaaaactagagggtaatgggaatactctcgtagtcgtcgaa
catgacgatgacaccatacgatcagcggaacatattatcgatgtgggacctggtgcgggc
gttcgtggaggtcggattatcgctcaagggacatatgatgatattgtaaaaaacaaaaat
tctgtgacgggcaaatatttggctgacccattaaagcattcatttaagagccgcataaag
tctgaatcttcaacagatatgataactatgcattcggcaaatttgcataatataaaagat
attgatgtactggtacctgtgggttgtctaacagtagtgacgggagtttctggttcggga
aaatcaacacttgcacgtgatattcttttaacgaatgtaaaggaggccattgccaaccaa
aagagtccaaaaaatatcgaatgggaaaatgtgcatcatatcgatggatgggaaaaaatt
acacgcgttcttgaggtggatcagaccccaattggaaaaacgccgcggtcatgtcctgca
acgtacgttggtttttgggacgatatacgtaaactttttgcacaaacgactgaagcgaaa
atgcgaggttggacggcatcgcgattttcatttaatacgggcaaagggcgttgcctgata
tgtgaagggcaaggcatgcgtacggttgagatgaattttttacctgacgttaaggtgcag
tgcgaagcttgtaatggtatgcgttttaattcagatacgttgcaagtaaaagtacgagac
aagagcattggcgatattctaaaaatggatattgatgaggctgttccttttttcgaaaat
catcctaaggtattgcgtcctttaaaactgcttcaagatgtagggctaggttacttaact
ttggggcaaccctcgcctacattgtcagggggagaagctcaacgcattaagttagtgtct
gagcttgtaaaagctcgcatggatgaaggggttactaagactgggcgtgcatctgtacga
gctcacactctttatattttggacgaaccaacagttggcctatcaatggctgatgttgaa
aaattaatagatgtactacataggcttgtggatagttctaatactgtagttgtgattgaa
cataatttggatgtaatggctgaggcggattggattattgatatgggccctgagggcggg
gatcgcggcggtaagcttgtatatagtgggacaccttcaaaaatgctacgcactaaaggg
catacagcaagagttttaaaagaactcaaaagagcttag
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