KEGG   Thermococcus barophilus: TERMP_00342
Entry
TERMP_00342       CDS       T01377                                 
Name
(GenBank) DNA polymerase sliding clamp protein
  KO
K04802  proliferating cell nuclear antigen
Organism
tba  Thermococcus barophilus
Pathway
tba03030  DNA replication
tba03410  Base excision repair
tba03420  Nucleotide excision repair
tba03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tba00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TERMP_00342
   03410 Base excision repair
    TERMP_00342
   03420 Nucleotide excision repair
    TERMP_00342
   03430 Mismatch repair
    TERMP_00342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tba03032]
    TERMP_00342
   03400 DNA repair and recombination proteins [BR:tba03400]
    TERMP_00342
DNA replication proteins [BR:tba03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    TERMP_00342
DNA repair and recombination proteins [BR:tba03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TERMP_00342
   MMR (mismatch excision repair)
    Other MMR factors
     TERMP_00342
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    TERMP_00342
SSDB
Motif
Pfam: PCNA_N Rad1 PCNA_C Hus1 Rad9
Other DBs
NCBI-ProteinID: ADT83319
UniProt: F0LIX3
LinkDB
Position
286957..287709
AA seq 250 aa
MPFEIVFDGAKDFATLIATASNLIDEAAFKVTEDGISMRAMDPSRVVLIDLNLPAGIFSK
YEVDGEETIGVNMDHFKKILKRGKSKDILILKKGEENFLEVTLQGTATRTFRLPLIEVEE
LELELPELPFTAKAVVLGEVLKEAVKDASLVSDSLKFIARENEFIMKAEGETNEVEIKLT
LEDEGLLDLEVQEETKSAYGISYLADMVKGIGKADEVIIQFGNDMPLQMDYPVRDEGKLT
FLLAPRVEEE
NT seq 753 nt   +upstreamnt  +downstreamnt
atgccgtttgagattgtttttgatggggcaaaggattttgcaactttgatagcaacagca
agcaatttgattgatgaagcagccttcaaggttactgaagatggtataagcatgagggca
atggatccaagcagagtcgttcttattgacctcaacctgccggctggaattttctcaaaa
tatgaggttgatggagaagaaacaatcggcgttaatatggaccacttcaagaaaatcctc
aaaagaggaaagagcaaggacattcttatccttaaaaaaggtgaggagaacttccttgag
gtaacccttcagggaacagcaacaaggacattcagactgccgctcatcgaggtggaagag
cttgagcttgaactcccagagctgcccttcacagcaaaagcagttgttctgggggaggtt
ctcaaggaagctgttaaggacgcttcgctcgtcagcgacagtctgaagttcatcgcaaga
gagaatgaattcataatgaaggctgaaggagagactaatgaggttgagataaagctcaca
cttgaagacgaaggcttgcttgaccttgaagttcaggaggaaacaaagagcgcctatgga
atcagctatcttgctgatatggtcaagggaattggtaaggcagatgaagtcatcattcag
tttggaaacgacatgccccttcagatggactatccagtaagagatgaaggaaagctgacc
ttcctccttgcaccaagagttgaagaggagtga

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