Thermus brockianus: A0O31_00943
Help
Entry
A0O31_00943 CDS
T04600
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tbc
Thermus brockianus
Pathway
tbc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0O31_00943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbc03400
]
A0O31_00943
DNA repair and recombination proteins [BR:
tbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0O31_00943
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A0O31_00943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
HerA_C
AAA
nSTAND3
AAA_7
AAA_19
Motif
Other DBs
NCBI-ProteinID:
APD09109
UniProt:
A0A1J0LUH3
LinkDB
All DBs
Position
complement(872178..874175)
Genome browser
AA seq
665 aa
AA seq
DB search
MTFRYRGPEPKGDQPKAIGELVAALRDGERYLTLLGATGTGKTVTMAKVIEALGRPALVL
APNKILAAQLAAEFRELFPENAVEYFISYYDYYQPEAYVPGKDLYIEKDASINPEIERLR
HSTTRSLLTRRDVIVVASVSAIYGLGDPREYRARNLVVERGAVYPREALLERLLELGYQR
NDIDLAPGRFRAKGEILEIFPAYDTEPIRVELWGDEVERISQVHPVTGERLRDLPGFVLF
PATHYLSPEGMEEILAEIRKELEERVRYFEERGEVLYAQRLKERTLYDLEMLRVMGTCPG
VENYARYFTGKAPGEPPYTLLDYFPEDFLVFLDESHVTVPQLQGMYRGDYARKKTLVDYG
FRLPSALDNRPLRFEEFLERVSQVVFVSATPGPFELAHSGRVVEQIIRPTGLLDPLVVVK
PTENQILDLMEGIRERAKRGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFERQ
ALIRDLRLGHYDCLVGINLLREGLDIPEVSLVAILDADKTGFLRSERSLIQTIGRAARNA
RGEVWLYADQVSEAMARAIAETHRRRALQEAYNREHGIVPETVRKEVRAVIRPEGYEEAP
LAPSLAEEDLKERIAELELAMWQAAEALDFERAARLRDELRALEAHLQGLRTPEPVPGKR
KRRKR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaccttccgctaccggggtcccgaacccaagggggaccagcccaaggccatcggggag
ctggtggcagctttaagagatggagagcgctacctgaccctcctcggggccacgggcacg
gggaagacggtgaccatggccaaggtcatagaggccctgggccgccccgccttggtcctc
gcccccaacaagatcctggcggcgcagctcgccgcggagttccgggagcttttcccggag
aacgccgtggagtacttcatcagctactacgactactaccagcccgaggcctacgtgccg
gggaaggacctctacatagagaaggacgccagcatcaaccccgagattgagcgcttaagg
cactccaccacccgaagcctcctcacccggcgggacgtgatcgtggtggcctcggtttcc
gccatttacggcctgggggatcccagggagtaccgggcgcggaacctggtggtggagcgg
ggggcggtctacccgcgggaggcgctcttggagcgcctcttagagctgggctaccagcgg
aacgatatagaccttgcccccgggcgctttcgggccaagggggagatcctggagatcttc
cccgcctatgacaccgagcccatccgggtggagctatggggcgacgaggtggagcgcatc
agccaggtccaccccgtcaccggggaaaggcttcgggatcttcccggcttcgtgcttttc
cccgccacccactacctctccccggagggcatggaggagatcctggccgagatccgcaag
gaattggaggaacgggtccgctactttgaggagcggggggaggtcctctacgcccagcgc
ctcaaggaacgcaccctttatgacctggagatgctcagggtcatgggcacctgcccgggg
gtggagaactacgcccgctacttcacgggcaaggccccgggggagcccccttacaccctt
ctggactacttccccgaggacttcctggtcttcctggacgagtcccacgtgaccgtgccc
cagctccagggcatgtaccggggggattacgcccgcaagaagaccctggtggactacggc
ttccgcctgcccagcgccctggacaaccgccccttgcgctttgaggagttcttggagcgg
gtgtcccaggtggtcttcgtctccgccaccccgggaccctttgagctcgcccactcgggc
cgcgtggtggagcagatcatccgccccacggggcttttggaccccttggtggtggtgaag
cccacggagaaccagatcctggatctcatggaggggatccgggaaagggcgaagcggggg
gagcgcaccctggtcacggtgctcaccgtgcgcatggcggaggaactcacgagctttctg
gtggagcacggcatccgtgcccgctacctccaccacgagctggacgcctttgagcgccag
gccctcatccgggaccttaggctaggccactacgattgcctggtgggcatcaacctgttg
cgggaaggcctggacatccccgaggtttccctggtggccatcctggacgccgacaagacg
ggcttcctaaggagcgaaagaagccttatccagaccatcggccgggcggcgcggaacgcc
cggggggaggtgtggctttacgccgaccaggtgtccgaggccatggcgagggctattgcc
gagacccatcggcggcgggccctccaggaggcctacaaccgggagcacggcatcgtgccg
gagacggtgcggaaggaggtgcgggcggtgatccgcccggaggggtacgaggaagccccc
ttggcgccttcgttggcggaagaggacctcaaggagcgcatcgccgagctggaactcgcc
atgtggcaggcggcggaggccttggactttgagcgggcggcgcggcttagggatgagctt
cgggccctcgaggcccacctccaagggcttaggacccccgagcccgtgccggggaagcgg
aagcggaggaagcgctaa
DBGET
integrated database retrieval system
