Thiocapsa bogorovii: LT988_15490
Help
Entry
LT988_15490 CDS
T07840
Name
(GenBank) phytoene/squalene synthase family protein
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
tbog
Thiocapsa bogorovii
Pathway
tbog00906
Carotenoid biosynthesis
tbog01100
Metabolic pathways
tbog01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tbog00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
LT988_15490
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tbog01006
]
LT988_15490
Enzymes [BR:
tbog01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
LT988_15490
Prenyltransferases [BR:
tbog01006
]
Terpene biosynthesis
Squalene/phytoene synthase
LT988_15490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
UHD14689
LinkDB
All DBs
Position
3448148..3449215
Genome browser
AA seq
355 aa
AA seq
DB search
MPQPMLKTDHASAADIAACRQLLRTGSRSFYAASFLLPQRIRDPAIALYAFCRIADDAID
CAGEEPGAQTRALAELHHRLDRIYDGEPVDEYTDRALADVVRCFGIPKALLEALLEGFEW
DAEGRRFEDLSGVYDYSARVAGTVGAMMAALMGARSTQLVARACDLGVAMQLTNIARDVG
EDARNGRLYLPMSWMREVGIDPEAWLKEPVFNDALASVIERLLRAAETLYVRSDAGIAGL
PMGCRAGINAARYLYAEIGRQVERQGLDSISRRAVVPGSRKVQLLAPILGAAVLSPRYVS
APPLDETRFLVDAVVYSAHRSSEEETAAPAGVGGRVIWVLELFEQLEERERALTN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaacctatgcttaagaccgatcacgcgagcgcggcggatatcgccgcgtgtcgc
caactgctgcggaccggctcgcgttcgttctacgcggcctcttttctcttgcctcagcgc
atccgcgatcctgccatcgcgctctacgccttctgtcgcatcgccgacgatgcgatcgat
tgcgcgggcgaggagcccggcgcccagacccgcgccttggccgagctgcaccatcgtctc
gatcgtatctacgacggcgagccggtcgatgaatacaccgatcgcgccttggccgacgtg
gtcaggtgcttcgggatcccgaaggcgctgctcgaggccctgctcgaagggttcgagtgg
gatgccgaaggtcggcgcttcgaggacctctcgggcgtctacgactattcggcgcgggtc
gcgggtaccgtgggtgccatgatggcggccctcatgggcgcgcgcagtacgcagctggtg
gcgcgtgcctgcgatcttggcgtggccatgcagttgaccaatatcgctcgcgatgtcgga
gaggatgcccgtaacggccgcctttacctgccgatgtcgtggatgcgcgaggtcgggatc
gaccccgaggcctggcttaaggaacccgtcttcaacgatgcactcgccagcgtgatcgag
cgtctgctgcgcgcggccgaaacgctgtatgtgcggtccgatgcagggatcgccgggttg
cccatgggctgtcgagccggtatcaacgccgcccgctatctttatgccgagattggacgt
caggtcgagcgccagggtctggactccatctcccgccgtgccgtagtgcccggcagtcgc
aaggtccagctcttggcgccgatcctcggagccgccgtgttgtctccacgttacgtctcc
gctccaccgctcgacgagacgcgcttcctggtggacgccgtggtctactccgcccatcgg
tccagtgaagaggagaccgcagcccccgccggtgtgggcggtcgcgtgatctgggtactg
gagctctttgagcagctcgaggagcgcgagcgcgcgttgaccaactga
DBGET
integrated database retrieval system
