Tenericutes bacterium MZ-XQ: BK011_04415
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Entry
BK011_04415 CDS
T05490
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tbz
Tenericutes bacterium MZ-XQ
Pathway
tbz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BK011_04415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tbz03400
]
BK011_04415
Enzymes [BR:
tbz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BK011_04415
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BK011_04415
DNA repair and recombination proteins [BR:
tbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BK011_04415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TF_Zn_Ribbon
Auto_anti-p27
DUF2835
NFACT_N
zf-ACC
HMBD
Zn_Tnp_IS1595
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
AUD64956
UniProt:
A0A2K9A145
LinkDB
All DBs
Position
complement(888510..889319)
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETVRRTLLLKLKDQVIADTLIRYPNIIKTELKDFKHTLINQTIHDIKRMGKYL
IFILDHHVVIMHLRMEGKFFIKTTEPYDKHEHIIFTFKSGLQLRYHDVRKFGTMHVLPLE
TYLNEYPLNELGLEPKDLNPKDFYAKIHKSERPIKASLLDQHIISGLGNIYVDETLFLAK
IHPVRKSKSITKKDAEKLILAATSVLEKAVQLGGTTIRSYTSSLGVHGRFQNELNVHTKK
GEPCPICGTTIIKIKVAGRGSYVCPSCQT
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttccagaagtagaaactgtaaggcgtaccttacttttgaaattaaaagac
caagtgattgctgataccttaatcagatatccaaatattattaaaactgaacttaaagat
tttaagcatacattaatcaatcaaaccatacacgatatcaagcgtatggggaaatatttg
atatttatattagatcatcatgtggtaatcatgcatttaagaatggaaggtaaatttttc
attaaaacaactgaaccttatgataaacatgagcatatcatctttacatttaaaagtgga
ttacaactaagatatcatgatgttaggaagtttggtacgatgcatgtcctacctttagag
acatacttaaatgaatatccattaaatgagttaggtttagaacctaaagatttgaatcct
aaagatttttatgctaagatccataaatcagaaagaccgatcaaagcaagtctccttgat
caacatatcatcagtggtcttggaaatatatatgtcgatgaaactttgtttcttgcaaag
atccatccagtaagaaaatcaaaaagtattacgaaaaaagatgctgaaaaactcatatta
gcagcaacatctgttttagaaaaagcagttcaacttggaggaacaaccataagatcatat
acatcatctttaggtgtacatggtcgatttcaaaatgagcttaatgtgcacacaaaaaag
ggtgaaccttgcccgatttgtggcacaacaatcataaaaattaaagtagcaggacgtggt
tcttatgtctgcccatcatgccaaacctaa
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