Theobroma cacao (cacao): 18601496
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Entry
18601496 CDS
T02994
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH18, mitochondrial
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tcc03029
]
18601496
Enzymes [BR:
tcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
18601496
Mitochondrial biogenesis [BR:
tcc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
18601496
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GFIT
Motif
Pfam:
Suv3_C_1
Helicase_C
SUV3_C
DEAD
Motif
Other DBs
NCBI-GeneID:
18601496
NCBI-ProteinID:
XP_007032513
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Position
4:complement(14762542..14766624)
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AA seq
852 aa
AA seq
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MGRGLATFLLRIYTSNNNVSRVKFMLSNRYFHPFRQFENWVLDKDRFVPSFDVPKREFST
SLIGLVGKFRNSECVSVRPFSSVVGNGDDDGGEDRGMRGSRMEGIKEGRNVVDFVKSIDF
DGVNENMGEDGVGCFNENGMYGSRDVESEHRSDKENKDIVDFMRSIDFDCVNEKRDEDGV
DDFNDNGLCDSTTVESECESDDVGNDRTVCGEHVAFCDPVKLYQELRNSEKGVKLKRADW
EILQEVFIYFSKSGWAANQSLAIYVGRSFFPTAACKFRSFFFKKCSAVVVKHVISLGPSD
VAVKFLFPIFVEFCIEEFPDEIKRFRSMIQSADLTKPHTWFPFARAMKRKIIYHCGPTNS
GKTYNALQQFMEAKKGIYCSPLRLLAMEVFDKVNAQGVYCSLHTGQEKKYVPFSNHVACT
VEMVSTDELYDVAVIDEIQMMSDPYRGYAWTRALLGLKADEIHLCGDPSVLNIVRKICSD
TGDELHENHYDRFKPLVVEAKTLLGDLQNVRSGDCVVAFSRREIFEVKMAIEKHTSHRCC
VIYGALPPETRRQQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYSLSKYNGDKIVA
VPASQVKQIAGRAGRRGSRYPDGLTTTLHLDDLDYLIECLKQPFEEVKKVGLFPFFEQVE
LFAGQLPNITFCQLLEKFGENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDRFNFCFA
PVNVRDPKAMYHLLRFASAYSRNVPVNIAMGIPKGSAKNDAELLDLETKHQVLSMYLWLS
HHFKEETFPYVKKAEEMAIDVADLLGQSLVNACWKPESRQAKKSKPQEKEEGYQRPRSLI
KLHEKKRQINPC
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggcttagcaacgtttctgcttagaatctatacatcgaacaacaatgtttct
agagttaagtttatgttatccaatcgatattttcatccctttagacaatttgagaactgg
gttttagataaagaccgttttgtgccatcttttgatgtgcccaaaagagagttttctacg
agtttgattggtttagttggtaaatttaggaattctgaatgtgttagtgttagaccattt
tcatctgttgttggaaatggggatgatgatggtggggaggatagaggaatgcgtggatca
agaatggaaggaattaaagaggggaggaatgttgtggattttgtgaaaagtattgatttt
gatggtgtcaatgagaatatgggtgaagatggtgttggttgttttaatgagaatggtatg
tatggttcaagagatgttgagtcagagcatcgaagtgataaagagaataaggatattgtg
gattttatgagaagtattgattttgattgtgtcaatgagaagagggatgaggatggtgtt
gatgattttaacgataatggtctgtgtgattcaacaactgttgaatctgaatgtgaaagt
gatgatgtaggtaatgatagaactgtgtgtggtgagcatgttgcattttgtgaccctgtg
aaattgtatcaggagcttcgtaattctgaaaaaggtgtgaagctgaaacgggcagattgg
gagattctacaggaagttttcatttatttcagtaaatcagggtgggcagccaatcagtct
cttgcaatttacgttggcaggtcattttttccaactgctgcttgtaagtttcgcagtttt
ttctttaagaagtgttctgctgttgttgtcaagcacgtgatatcactgggtccatctgat
gttgctgttaagtttcttttccctatatttgtggagttctgtattgaagaatttcccgat
gagatcaagcggtttcgaagtatgattcaatcagcagatcttacaaagccacacacatgg
tttccctttgcacgggcaatgaagcgtaagattatttatcattgtggtccaacaaatagt
ggcaagacctacaatgctttgcagcagtttatggaagcaaagaagggtatttattgcagt
ccacttaggcttttggctatggaagtttttgacaaagtgaatgcacaaggagtttactgt
agtctccacacagggcaagaaaaaaaatatgtcccattttcgaatcacgttgcctgtact
gtggaaatggtatcaacggatgaattgtatgatgtagctgtgattgacgaaatccagatg
atgtcagacccgtatagaggttatgcatggacacgggcattgcttggattgaaagctgat
gagatacatttgtgtggtgatccaagtgttctgaatattgtcagaaagatctgttcagat
actggagatgagttgcatgaaaatcattacgaccggttcaaaccattagtggttgaagcc
aagactctactgggagaccttcaaaatgttcgatctggtgattgtgttgttgctttctca
aggagagagatatttgaggtgaaaatggctattgagaaacacacaagtcatcgctgctgt
gttatttatggtgcactgccaccagagactcgcagacagcaagctaacttgtttaatgat
caagataatgaatttgatgtgcttgttgccagtgatgctgtgggaatgggattgaatctt
aatattaggagagttgtcttttatagtctttccaaatacaatggggacaagattgttgca
gtcccagcatcacaagttaagcaaattgctggaagagctggccgcagaggaagccgatat
ccagatggactgacaacaaccttgcatttagatgatctggattatctaattgagtgttta
aagcaaccctttgaagaagttaagaaagtgggcctgtttcctttttttgagcaggttgaa
ttgtttgctgggcaactccctaatattactttttgccagttgcttgaaaaatttggtgaa
aattgccgtttggatgggtcatactttttgtgccggcatgatcatattaagaaggtagcc
aatatgttggaaaaggtccagggactatctctagaagatcggttcaacttttgttttgct
ccagtcaatgttagagacccgaaagcaatgtatcatctccttcggtttgcttctgcttac
agtcgaaatgtccctgttaacatagcaatgggcattccaaaaggttctgctaaaaatgat
gcggaacttctggatcttgagactaaacaccaagttttatccatgtatctatggttatct
caccatttcaaggaagaaacctttccttatgtgaagaaagcagaagaaatggctattgat
gttgctgatttgttgggtcagtctcttgtcaatgcatgctggaaaccagaatcaagacag
gcgaagaaatctaagcctcaagagaaggaagaaggatatcagagaccaaggtcactgatc
aagttacatgagaagaaaaggcagataaatccttgctag
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