Theobroma cacao (cacao): 18609518
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Entry
18609518 CDS
T02994
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc00040
Pentose and glucuronate interconversions
tcc01100
Metabolic pathways
Module
tcc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18609518
Enzymes [BR:
tcc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
18609518
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pectate_lyase_3
GPR15L
Motif
Other DBs
NCBI-GeneID:
18609518
NCBI-ProteinID:
XP_017970601
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Position
2:32654440..32657439
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AA seq
473 aa
AA seq
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MRRDKSLYLLALVAIMFLVFITSSITSVEGRKHNVNKGKPHKHQKDKNHKGNGAPHSSPA
PAPLPGYDYYPTGSNIFDVLSFGAKGDGVSDDSKALLAAWKAACKVPGATVEIPSEFKFL
VKPLTLQGPCMPNLVFQIDGALLAPPKVGSWPKSSLFQWINFKWIHNFTIQGTGVVDGQG
SQWWTPSDQIYYIQKKFKHIPNWKPTALRFYSSYNVTVRDIQIINSPQCHLKFDSSGGIK
VNNLTISSPESSPNTDGIHLQNTRDVEILYSNIGCGDDCVSIQTGCSNVHIHHVNCGPGH
GISLGGLGKDKSVACVSDIVVEKISLLNTLAGVRIKTWQGGMGSVKNVSFSNIQVSDVKV
PIIIDQYYCDKNVCKNQTGAVAISGVTYDQIIGTYSVQPIHLACSNDIPCTDVDLIDIQL
KPSLRYRGFHQALCWNSYGKSQAPLLPSNIDSCLRRDGGSVKRIARSREHVCF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaggagagataagagtttatatcttctagcacttgtggctatcatgtttcttgtattc
atcacatcttctataacctcagtcgagggaagaaagcataatgtcaataaaggcaagcct
cataagcatcaaaaagataagaaccacaaaggtaacggcgctccacactcaagccctgca
ccagcgcctcttcctggttacgactattatccaactggttcgaacatttttgatgttttg
tcttttggagccaagggtgacggagtttctgatgattcaaaggcacttctagcagcatgg
aaagctgcctgcaaggtgcctggggctacagtagaaattccatcagaattcaaattcctg
gtcaagcccttaactcttcaaggtccatgcatgcctaaccttgtttttcagatagatgga
gctctgttagcccccccaaaagtgggttcatggccaaagtccagtttgtttcaatggata
aacttcaaatggatccataattttactattcaaggtactggagttgttgatggtcaaggc
tctcagtggtggactccatctgatcagatttattatattcagaaaaaattcaaacacatt
ccaaattggaaaccaaccgctttaagattctactcaagctacaatgtgacagttcgcgac
atccaaatcataaacagccctcaatgccacctaaaatttgatagctcaggtggtatcaaa
gtaaacaaccttacaatttcttctccagagagtagtccaaataccgatggtattcatctg
caaaacactcgagatgtagaaattctgtattccaatattggctgtggagatgactgtgta
tccattcagacaggttgctcgaacgttcatattcaccatgttaattgcggccctggtcat
gggattagtttgggagggctggggaaagacaagagtgttgcatgtgtctcggatatagtt
gttgaaaagatctcactgctgaatacactagctggagttagaatcaagacttggcagggt
ggtatgggatctgtcaagaacgtctcattctccaatattcaagtctctgacgtaaaggtt
cctataataattgaccagtactactgtgacaagaatgtttgcaagaaccaaacaggagcc
gtggcaatatctggtgttacatatgatcaaataatcggaacttattcggtacaaccgatt
catcttgcttgtagcaatgacatcccatgcactgacgttgatcttatcgatattcaatta
aaaccctcccttagatatcgaggtttccatcaagcattatgttggaactcttatgggaaa
tcacaggcccctttgcttccttcaaacatagactcttgcctaagaagggatggtggttca
gtcaagagaatagctagatctcgcgagcatgtttgtttttag
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