Pseudoduganella chitinolytica: PX653_09875
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Entry
PX653_09875 CDS
T08857
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
tct
Pseudoduganella chitinolytica
Pathway
tct03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PX653_09875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tct03400
]
PX653_09875
DNA repair and recombination proteins [BR:
tct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PX653_09875
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
CENP-B_dimeris
Motif
Other DBs
NCBI-ProteinID:
WEF35047
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All DBs
Position
2233360..2234469
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AA seq
369 aa
AA seq
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MARALWKGAISFGLVHIPVELHSAVKSNDLDLTMLDKRDFSPIGYKRYNKTTEKEVTWDN
IIKGYEYQAGEYVVLSDEDLRQANVKATQTIDILAFVDAEDVPLTYYETPYYLAPGRGGD
KVYALLRETLRRAGKIGIATVVIRTKQHLCALVAAEDGIIMNTLRYADEIRDTEDLKLPD
KGTKATGIKEKELEMALSLVEGMSEDWAPEQYHDTYKDDVLALVEKKIKARQTKTITLPS
KDDEAAPSTNVIDLVALLKQSLGAKPGKGKAAAADDDEEEDQADTDEESDDDEPPPKARR
PVPRGTTSVNARGGTSTRAAGKSTATAKSKASPAKAEASKSVAKKAAAKPAAKKTAAKPA
STSTRRRAA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgcgctgtggaaaggcgccatcagcttcggcttggtgcacataccggtcgag
ctgcattcggccgtcaagagcaacgacctcgacctgacgatgctggacaagcgcgacttc
tcccccatcggctacaagcgctacaacaagacgaccgaaaaggaagtcacgtgggacaac
atcatcaagggctatgaataccaggccggcgaatacgtggtgctgtcggacgaggacttg
cgccaggccaacgtcaaggccacgcagaccatcgacatcctcgccttcgtcgatgccgag
gacgtgccgttgacctactacgagacgccctactacctggcccccggccgaggcggggac
aaggtctatgcgctgctgcgcgagaccttgcgacgggccggcaagatcggcatcgccacg
gtggtcatccgcaccaagcagcacctgtgcgcgctggtcgccgccgaggacggcatcatc
atgaacaccttgcgctacgccgacgagatccgcgataccgaagacctgaagttgcccgac
aagggcaccaaggccaccggcatcaaggaaaaggaactggaaatggcgctgtcgctggtg
gaaggcatgagcgaggactgggcgccggagcagtaccacgacacgtacaaggatgacgtg
ctcgccctggtggagaagaagatcaaggccaggcagaccaagaccatcacgctgccgtcc
aaggacgacgaggcggcgccgtcgaccaacgtgatcgacctggtggcgctcctgaagcag
tcgctgggcgccaagcccggcaagggcaaggcggccgcggcggacgacgacgaggaagaa
gaccaggccgataccgacgaggaatcggacgacgacgagccgccacccaaggcccggcgg
cccgtgccgcgcggcaccaccagcgtgaatgcccgcggcggcacgtccacccgcgccgcc
ggcaagagcacggccacagcgaaatcaaaggccagcccggccaaggcggaggcgtcgaag
tcggtggcgaagaaggctgccgcgaagccggcggcgaagaagacagcggccaagccggcc
agtacgtcgacccggcgccgcgctgcttga
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