KEGG   Pseudoduganella chitinolytica: PX653_09875
Entry
PX653_09875       CDS       T08857                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
tct  Pseudoduganella chitinolytica
Pathway
tct03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tct00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PX653_09875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tct03400]
    PX653_09875
DNA repair and recombination proteins [BR:tct03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     PX653_09875
SSDB
Motif
Pfam: Ku CENP-B_dimeris
Other DBs
NCBI-ProteinID: WEF35047
LinkDB
Position
2233360..2234469
AA seq 369 aa
MARALWKGAISFGLVHIPVELHSAVKSNDLDLTMLDKRDFSPIGYKRYNKTTEKEVTWDN
IIKGYEYQAGEYVVLSDEDLRQANVKATQTIDILAFVDAEDVPLTYYETPYYLAPGRGGD
KVYALLRETLRRAGKIGIATVVIRTKQHLCALVAAEDGIIMNTLRYADEIRDTEDLKLPD
KGTKATGIKEKELEMALSLVEGMSEDWAPEQYHDTYKDDVLALVEKKIKARQTKTITLPS
KDDEAAPSTNVIDLVALLKQSLGAKPGKGKAAAADDDEEEDQADTDEESDDDEPPPKARR
PVPRGTTSVNARGGTSTRAAGKSTATAKSKASPAKAEASKSVAKKAAAKPAAKKTAAKPA
STSTRRRAA
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggcacgcgcgctgtggaaaggcgccatcagcttcggcttggtgcacataccggtcgag
ctgcattcggccgtcaagagcaacgacctcgacctgacgatgctggacaagcgcgacttc
tcccccatcggctacaagcgctacaacaagacgaccgaaaaggaagtcacgtgggacaac
atcatcaagggctatgaataccaggccggcgaatacgtggtgctgtcggacgaggacttg
cgccaggccaacgtcaaggccacgcagaccatcgacatcctcgccttcgtcgatgccgag
gacgtgccgttgacctactacgagacgccctactacctggcccccggccgaggcggggac
aaggtctatgcgctgctgcgcgagaccttgcgacgggccggcaagatcggcatcgccacg
gtggtcatccgcaccaagcagcacctgtgcgcgctggtcgccgccgaggacggcatcatc
atgaacaccttgcgctacgccgacgagatccgcgataccgaagacctgaagttgcccgac
aagggcaccaaggccaccggcatcaaggaaaaggaactggaaatggcgctgtcgctggtg
gaaggcatgagcgaggactgggcgccggagcagtaccacgacacgtacaaggatgacgtg
ctcgccctggtggagaagaagatcaaggccaggcagaccaagaccatcacgctgccgtcc
aaggacgacgaggcggcgccgtcgaccaacgtgatcgacctggtggcgctcctgaagcag
tcgctgggcgccaagcccggcaagggcaaggcggccgcggcggacgacgacgaggaagaa
gaccaggccgataccgacgaggaatcggacgacgacgagccgccacccaaggcccggcgg
cccgtgccgcgcggcaccaccagcgtgaatgcccgcggcggcacgtccacccgcgccgcc
ggcaagagcacggccacagcgaaatcaaaggccagcccggccaaggcggaggcgtcgaag
tcggtggcgaagaaggctgccgcgaagccggcggcgaagaagacagcggccaagccggcc
agtacgtcgacccggcgccgcgctgcttga

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