Thiomicrospira cyclica: Thicy_0705
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Entry
Thicy_0705 CDS
T01517
Name
(GenBank) YcaO-domain protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
tcy
Thiomicrospira cyclica
Brite
KEGG Orthology (KO) [BR:
tcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcy03009
]
Thicy_0705
Ribosome biogenesis [BR:
tcy03009
]
Prokaryotic type
ribosomal protein modification factors
Thicy_0705
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AEG31477
UniProt:
F6DC91
LinkDB
All DBs
Position
853428..855164
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AA seq
578 aa
AA seq
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MSEQTRIKGKDASLEASLLKMQGIFDQLSIDLDKQQWLNPAENIYSLHIFDKACPALFTN
GKGASRKATQASAMGEYLERLSTNYFFSDYYLTLREEADGQLFGDWLYYPNDRHFELADY
RQALSDELWQLYDPQQELTAQHLLSFNDTSPFIRAIAMTEQISNERVFFPVNILSNLYAS
NGLSAGNTPLESAVQGLSEIFERWVKNKILTDNICLPEVPADVIAQYPSIAQAIADLEIQ
GLGVSVRDASLGGQFPVMNVTLFNPKTGQCFASFGAHPLFEVALERTLTESLQGRHLQNL
DGFQTPTLDQFVVAEAENLENHFIDSSGLINLHMLASTPDYEFCAWEGAQTTAEQWSELL
AKVTALGFKVYRADYQHHDFCATRLIVPGMSEVYPMDELVLKNQNDGRLLREALFKAEQG
DYAAVLSVLDQVGFSDHQGVASLIGLMPDPNQAWSALKIADLRFWTELALQDYEAAADSL
YIAKAYASAGAAGWQPIYELMDLCLALKLQDKDVGHYEASLNNLFGQDKVAKAQQHLSGD
VVFWGLSLGRAMFFKSQRHQQMLQVLDKARQAKLAFGY
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgaacaaacaagaattaaaggcaaggatgcaagcttagaagcgtcgctgctaaaa
atgcagggcatttttgatcagttaagcatcgatttagataaacagcagtggttaaatcct
gctgaaaatatttattccctacatatattcgataaagcctgtccggcgctatttaccaat
gggaaaggggcgagtcgtaaggcgacccaggccagtgccatgggtgaatatttagaacgt
ttatcgaccaactattttttctcagactattatttgactttgcgcgaagaagccgacgga
cagttgtttggtgattggctttattatcccaatgatcgtcattttgaattggcggattat
cgtcaggcgcttagcgatgagctgtggcagctttatgatccgcagcaagaattaaccgcg
caacatttgttaagttttaatgataccagtcctttcattcgtgcgattgcgatgacagag
caaattagcaatgaacgggtctttttcccagtgaatattttgagtaacctttatgccagt
aatggcttatctgccggtaacacgccgttagagtcggcggtgcaaggcttgtcagaaatt
tttgagcgttgggtaaaaaacaaaattttgacagacaatatttgcttgccggaagtgcca
gctgacgtaattgctcagtacccgagtattgcccaagcgattgcggatttagaaatacag
gggttgggggtatcggtacgtgatgcgtctttaggggggcagttcccagtgatgaatgtc
accttatttaaccccaaaaccggtcagtgttttgcctcctttggcgcgcatcctttattt
gaagtggctttagaacgaacgctgacggagtctttgcaaggtcgtcacttacaaaatctg
gatggatttcaaacgcccacgctggatcagtttgtggtggcagaggccgaaaatttagaa
aatcattttattgattcgtcggggctcattaatttgcatatgttagccagcacgccggat
tatgaattttgtgcttgggaaggtgcgcaaactacggcagaacaatggtctgaattatta
gctaaggtgaccgcgttaggctttaaggtctatcgtgctgattatcagcaccacgatttc
tgcgccacgcgtttgattgtgccaggtatgtcagaagtttatcctatggatgagctggtg
ctaaagaatcaaaatgacgggcgtttattgcgtgaggcgttatttaaagccgaacagggt
gattatgccgccgttttaagtgtccttgatcaggttggttttagtgatcaccaaggcgtg
gcatcgcttattggcttaatgcctgatcctaaccaggcctggtcagcattaaaaatagct
gacttacgtttttggacggagttggcattgcaggattatgaggcggcggccgactcatta
tatattgctaaggcttacgcttcggccggtgcggctggctggcaacccatatatgagtta
atggatttgtgtttagcacttaagttgcaggataaggatgttgggcactatgaagccagc
cttaacaatttgtttgggcaagataaggttgcaaaagctcagcagcatctgagtggcgat
gtggttttttggggattgtcattgggtcgtgcgatgttctttaaaagccagcgtcatcag
caaatgttgcaggtgttggataaggcgcggcaggctaagttagcatttggctattag
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