KEGG   Torulaspora delbrueckii: TDEL_0A03590
Entry
TDEL_0A03590      CDS       T02236                                 
Symbol
TDEL0A03590
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
tdl  Torulaspora delbrueckii
Pathway
tdl03020  RNA polymerase
tdl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tdl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TDEL_0A03590 (TDEL0A03590)
  09124 Replication and repair
   03420 Nucleotide excision repair
    TDEL_0A03590 (TDEL0A03590)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tdl03021]
    TDEL_0A03590 (TDEL0A03590)
   03019 Messenger RNA biogenesis [BR:tdl03019]
    TDEL_0A03590 (TDEL0A03590)
   03400 DNA repair and recombination proteins [BR:tdl03400]
    TDEL_0A03590 (TDEL0A03590)
Transcription machinery [BR:tdl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     TDEL_0A03590 (TDEL0A03590)
Messenger RNA biogenesis [BR:tdl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TDEL_0A03590 (TDEL0A03590)
DNA repair and recombination proteins [BR:tdl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TDEL_0A03590 (TDEL0A03590)
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25 MSSS
Other DBs
NCBI-GeneID: 11503075
NCBI-ProteinID: XP_003678902
UniProt: G8ZM47
LinkDB
Position
1:complement(639112..639627)
AA seq 171 aa
MFFIKDLSLNITLHPSFFGPHMKDYLKTKLLQEVEGSCTGKFGYILCVLDYDKIDIERGR
ILPTDGSADFIVRYRAVVFKPFRGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLI
FNAGSNPPSYQSSEDVITIKSRIRVKIEGCISQVSSIHAIGSIKEDYLGAI
NT seq 516 nt   +upstreamnt  +downstreamnt
atgtttttcatcaaggatctttcgctcaatattacacttcatccatcatttttcggtcca
catatgaaggattacctgaagactaagcttttgcaggaggtcgagggttcctgtaccggt
aagtttggatatattctctgtgtactcgactatgataaaattgatatcgagcgtggtaga
attcttccgacagatggttcagccgacttcatcgtcagatatagagctgtggtctttaaa
ccattcagaggtgaagttgtcgatggaactgtggtctcctgttcacaacatggttttgaa
gtccaagtaggacctatgaaagtatttgttactaagcatttgatgccacaagatttgata
ttcaatgcgggttcaaatccgccatcttaccaaagttccgaggatgtgattaccatcaag
agcagaattagagttaagatcgaaggttgtataagtcaagttagctccatccatgctatt
ggtagtatcaaggaggattacttgggtgctatatga

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