Torulaspora delbrueckii: TDEL_0H03730
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Entry
TDEL_0H03730 CDS
T02236
Symbol
TDEL0H03730
Name
(RefSeq) hypothetical protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
tdl
Torulaspora delbrueckii
Pathway
tdl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TDEL_0H03730 (TDEL0H03730)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdl03019
]
TDEL_0H03730 (TDEL0H03730)
Enzymes [BR:
tdl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
TDEL_0H03730 (TDEL0H03730)
Messenger RNA biogenesis [BR:
tdl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TDEL_0H03730 (TDEL0H03730)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TDEL_0H03730 (TDEL0H03730)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
TFIIA
Motif
Other DBs
NCBI-GeneID:
11501554
NCBI-ProteinID:
XP_003683443
UniProt:
G9A038
LinkDB
All DBs
Position
8:623125..625518
Genome browser
AA seq
797 aa
AA seq
DB search
MSNPSMLSYPSLGPQQQPNLMPGMRADTPNGMHQQLHGNPMGAVPPPGIMNPSMGVSGDS
VPHQLLSHLGQSGVDHSGAANGAAMTGNNGNEKNALYHPHLEEPALLNNPIWKLQLQLAA
VSMQSVGQPNVYARQNAMKKYLVNQQQQKQQQQQQQQPVLDHQRQPGLLQQISGGQPLQQ
QDQLQNPQMADASISLVDKTKQLLMEMATETKDNSATNNNPPGSANTYATGNTSGSISSP
STPKTELHHLRDQNTGTPTLLLQHKKLSQFNIDEDDETEHRMTAPKNTKFDDQLWHAIDF
SNLQIFNISSNLFKYTFLTRLYLNGNSLTSLPPQIKSLVNLRVLDLSHNRLTALPKELGL
CYQLKYLYVFDNQITTLPWEFGSLFNLQFLGCEGNPLDRQLLKILAEKSVTGLIFYLRDN
RPEVPLNKDRDFIEINAEGEPVEKYRSLHEADEHLSSELSKRSFTVLSYNTLCQHYATPK
MYRYTPSWALSWDYRREKLTEQILSYMTDVICLQEVEAKTFEEYWAPLMQKHGYSGLFHA
KTRAKTMHSKDSKKVDGCCVFYRENEFKLAYKDAVDFSGVWQKHKKFQRTEDYLNRAMNK
DNVAIYLKLQHIKSGESVWIVTTHLHWDPQFNDVKTFQVGVLMDHIENLLKEQSNAQSKQ
EAKKCPVILCGDLNSEIHSAVYELLSTGRVQAHDDIKGRDFGYMTQKNFAHNLAMKSSYS
YIGELPLTNFTPSFTSVIDYIWFSTQSLRVRGLLGPIDPDYISQFIGFPNAKFPSDHIPV
LARFEFLKGGAGSSRKI
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatccgtctatgttgagctatcctagcttgggacctcaacagcagccgaatttg
atgcctgggatgcgcgctgacacgcctaatgggatgcatcaacagttacatgggaatcca
atgggggctgttccaccgccaggcataatgaatccaagtatgggagtttcaggagactcg
gttccgcatcaattgctcagccatcttggccagagcggtgtagaccacagtggggccgcg
aatggtgcggcaatgactggcaataacgggaacgaaaagaatgctttgtaccatccacat
cttgaagagcctgccttattgaataatccgatttggaaattacagttacagttggcagct
gtgtctatgcaatctgtgggacaacctaacgtatatgctaggcaaaacgcgatgaagaaa
tacctagtgaaccagcagcaacagaagcagcaacagcagcaacaacagcagcctgtgcta
gatcatcagcggcagccggggctgttacagcagatttctgggggtcagcccttgcaacaa
caggatcaattgcaaaatcctcaaatggcagatgcgtcaatatctctagtcgataagacc
aagcaattgttgatggaaatggctacggaaaccaaagataacagtgctacgaataacaac
cctcctggctccgcgaatacttatgcgacggggaatacgagcggttccatatcttctcca
tctactccaaagacagagttacaccatttgagagatcagaacactggaactccaacatta
cttttacaacacaagaagctttcccagttcaatatagatgaagatgacgagacagagcac
cggatgactgcaccaaaaaacactaagtttgatgaccaactgtggcacgcaattgatttt
tcgaaccttcaaatctttaacatcagttccaatttgtttaagtatacattcctcaccaga
ttgtatttgaacggtaatagtttaacgtctttaccaccgcagatcaagtccctggtgaat
ttgcgtgtgctggatctgtcacacaacaggttgaccgcgttgcccaaggaactcgggctt
tgttaccaattaaaatacctctacgtttttgataaccagatcacaaccttaccgtgggag
tttggtagtcttttcaacttgcaattcctaggttgcgaaggcaatcccttggacaggcaa
ctactgaaaatactggccgagaaatcggtaacagggttgatcttttatttgcgtgacaac
agaccagaagtgccgctcaataaagaccgtgatttcattgagattaacgcagaaggcgaa
cccgtggagaaatacagatctttgcatgaagctgatgaacatttaagctccgagctgtct
aagagaagtttcactgttttgtcttacaacacactttgccaacattatgccaccccaaaa
atgtatcgttatacaccatcctgggctttgagttgggattacagacgtgaaaaactaacg
gagcaaattttgtcgtatatgacagacgtcatctgtttgcaagaagttgaggcaaagact
ttcgaagaatattgggcacctttgatgcaaaagcatggttactctggtttattccatgca
aagactagagccaagacaatgcattctaaggattcgaagaaagtagatggatgttgtgtc
ttttacagagaaaacgagttcaaacttgcttacaaagatgcagttgattttagcggagtc
tggcagaagcataagaaatttcaacgtacagaagactatttgaaccgtgcaatgaataag
gataacgttgctatctacctcaagttacaacatataaagagcggagaatcagtatggatc
gtcaccacacatttacattgggacccacaattcaacgacgtcaagactttccaggtcggt
gttctaatggaccacatagagaacctacttaaggagcaaagcaacgctcagtcaaaacaa
gaggcaaagaaatgtcctgtgatattatgtggggacttgaactctgagatacattcagca
gtttatgaactactaagcacgggacgcgtccaagcacatgatgatatcaagggaagagac
ttcggttacatgactcaaaagaattttgcccataacttagccatgaaatcgagttacagc
tacatcggtgaattgccattaactaacttcactccttcattcaccagtgtgatcgactac
atatggttttcgactcagtcactccgcgtacgtgggttacttggaccaatagatcccgac
tacatctctcaattcatcggattccccaacgcaaaattcccaagtgaccacatacccgta
ttggcgaggtttgagtttttaaaaggaggagccggctccagtagaaagatatga
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integrated database retrieval system
