Trichodesmium erythraeum: Tery_0027
Help
Entry
Tery_0027 CDS
T00387
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ter
Trichodesmium erythraeum
Brite
KEGG Orthology (KO) [BR:
ter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ter03032
]
Tery_0027
03400 DNA repair and recombination proteins [BR:
ter03400
]
Tery_0027
Enzymes [BR:
ter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Tery_0027
DNA replication proteins [BR:
ter03032
]
Prokaryotic type
DNA Topoisomerases
Tery_0027
DNA repair and recombination proteins [BR:
ter03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Tery_0027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DUF6429
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABG49550
CyanoBase:
Tery_0027
UniProt:
Q11AC4
LinkDB
All DBs
Position
complement(45501..48125)
Genome browser
AA seq
874 aa
AA seq
DB search
MSTLVIVESPTKARTIRNYLPSDYRVEASMGHVRDLPPSAEEIPEKFKGEKWAQLGVNVE
SDFEPIYVVPKDKKKTVKELKDALKEVDELLLATDEDREGESISWHLLQLLKPKVPTKRM
VFHEITPEAIRRAIDNCRNIDEQLVRAQETRRILDRLYGYTLSPVLWKKIARGLSAGRVQ
SVAVRLLVNRERQRQAFKRGGYWDLKASLEQEKTPFESKLVTLGGTKIATGNDFDENTGK
IVEGRNVILLDEAHAEALKEQLQHKPWTVNSFDERAVRRKPSPPFTTSTLQQEANRKLRM
GARQTMRTAQNLYEQGFITYMRTDSVHLSDEAIAAARSCVEKMYGPEYLSSEPRQYTTKS
KGAQEAHEAIRPAGKTFRTPQETGLKNQEFALYDLIWKRTVACQMADSRQTHITVNLQVE
DAGFRSNGKRIDFPGFLRAYVEGSDDPEVSLENQEVPLPAIKQGDHPACTEIEVVGHETQ
PPARFTEASLVKTLESEGIGRPSTYATVIGTIVDRGYAKLQSNALVPTFTAFAVTTLLEK
HFPEFVDVKFTARMEQTLDDISMGEAQWVPYLKKFYFGESGLDTQIKEQENQIDPKLART
IELDNLDANSEMTYRICIGKFGAYIEAENGENIVKASIPEDLTPSDLDPEQIEKLLKQKT
EGPQELGIHPEEDKSIYIMTGRYGPYVQLGDDSEGSKRKPKRASLPKGVNMEDVTLDLAV
GLLSLPRTLGTHPETGCKIQANLGRFGPYIVHDQGKEDGKDYRSLKVKDDVLTITLERAL
ELLAQPKRSRRGSAKAVLPLKDLGKHPEDGETVGVYDGRYGLYVKHGKVNASLPKDMSVE
DVTWEKALELLHAKASSKKSARGRKSTKSKAENN
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacccttgttattgtagaatctccgactaaagcccgcaccattcgcaactatcta
ccctccgactaccgcgtggaagcatctatgggtcatgtgcgtgacctaccaccttctgcc
gaggaaataccagaaaaattcaaaggagaaaagtgggcacagttaggggtaaatgtagag
tcagattttgaaccaatctacgttgtccccaaagacaaaaagaaaactgtcaaagaactc
aaagatgctctgaaagaagttgatgaattacttctagccacagatgaagaccgtgaagga
gaaagtataagttggcatttattgcaactactaaaaccaaaagttcctactaaacggatg
gtcttccatgaaattactccagaagctatccgtagagcaattgataattgtcgtaacata
gatgagcagttagtcagggcacaagaaactcgtcgtattctagaccgcctctacggttat
actctctcacctgtactttggaaaaaaattgccagaggtctttctgcaggtagagtacag
tcagtagcagtccgactcttggttaaccgagaacgccaacgtcaggcttttaagcgagga
ggttattgggatttaaaggctagtttagaacaagaaaaaactccatttgagtctaaactt
gtgacccttggggggacaaaaatagctactggtaatgactttgatgaaaatacaggcaaa
atagttgaaggtcgtaatgttattttattggacgaagctcatgcagaagctctcaaagaa
caactgcaacataagccttggactgttaatagttttgatgaacgagctgttagacgtaaa
ccatctccaccatttactacttctactttacaacaggaagctaaccgcaaactacgaatg
ggtgctaggcaaacaatgcggacagcccaaaatttatatgaacagggctttatcacttat
atgcggacagactcagtacatttgtctgatgaggcgatcgctgctgcccgaagttgtgtt
gagaaaatgtatggcccggaatatctaagttctgaacctaggcaatacactactaaaagt
aagggggctcaggaagctcacgaagctattcgccctgcaggtaaaacttttcgcactccc
caggaaacaggattgaaaaatcaagaatttgctctctatgacttaatttggaaaagaaca
gtagcttgtcaaatggctgattctcgtcaaacccatattacagttaatttacaagtagaa
gatgctggttttcgttctaatggaaaacggatagactttcctgggttcctccgggcttat
gttgaagggtctgatgaccccgaagtatctttggaaaaccaagaagtaccattgcctgct
ataaaacagggagaccatcctgcttgcacagaaatagaagtagtgggtcatgaaactcag
ccacctgccaggtttaccgaagcgtctttggtaaaaactttggaaagtgaaggtatcggc
cgtccgagtacctacgctactgttattggtactattgttgatcgtggttatgccaaactc
cagagtaatgctttagttccaacatttactgcttttgctgttacaactttactggaaaaa
cattttcctgagtttgtagatgtcaagtttactgcccgtatggaacaaaccctcgatgac
atttctatgggtgaagctcagtgggtaccttaccttaaaaaattttattttggggaaagt
ggacttgatactcaaatcaaggaacaggaaaatcaaattgaccctaagttggcccgaact
attgagttagataatttggatgctaattcagagatgacttatcgtatatgtattggtaag
tttggtgcttatattgaggcagaaaatggtgagaatatagtcaaagcttctattcctgaa
gatttaactccatcagacctagacccagaacaaatagagaaactgttgaagcaaaaaaca
gagggtccgcaggagttgggaattcatccagaagaagataagtctatctatataatgact
ggtcgttacggtccttatgtgcagttgggtgatgattctgagggtagtaagaggaaacca
aagcgagcttctttgccaaagggtgtcaatatggaggatgtaactttggatctagcggta
gggttattatctttacctcgtactttgggaactcatccagaaactggttgcaaaattcaa
gctaatttaggacgttttggcccatatatcgttcacgaccagggaaaggaggatggtaaa
gactatcgttctttaaaggttaaggatgatgttttgactattactttggaacgtgctttg
gagttattagctcaaccgaaaagatcgaggagaggtagtgctaaagctgtacttcccctc
aaagatttgggtaaacatcctgaagatggagaaacagtaggtgtttatgatggtcgatat
ggactttatgtgaagcatggtaaggttaatgcttctttgcctaaggatatgtctgttgag
gatgtaacttgggaaaaggctctagagcttttgcatgctaaggctagtagtaaaaaatct
gctcgtggtaggaaatccacaaagtcaaaagccgaaaataactag
DBGET
integrated database retrieval system
