Tachysurus fulvidraco (yellow catfish): 113655372
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Entry
113655372 CDS
T08119
Symbol
cdh23
Name
(RefSeq) cadherin-23 isoform X4
KO
K06813
cadherin 23
Organism
tfd
Tachysurus fulvidraco (yellow catfish)
Brite
KEGG Orthology (KO) [BR:
tfd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tfd03037
]
113655372 (cdh23)
04515 Cell adhesion molecules [BR:
tfd04515
]
113655372 (cdh23)
Cilium and associated proteins [BR:
tfd03037
]
Primary cilia and associated proteins
USH complex and associated proteins
113655372 (cdh23)
Cell adhesion molecules [BR:
tfd04515
]
Cadherins
Major cadherins
113655372 (cdh23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
113655372
NCBI-ProteinID:
XP_027021681
LinkDB
All DBs
Position
4:3482678..3670982
Genome browser
AA seq
3266 aa
AA seq
DB search
MKSEMQVAFSVSDSQGVVKDTVNIQIGDVNDNSPTFHNQPYTLNIPEDTPVGTSIFMVNA
TDPDQGTGGSVLFSFQPPSPFFSIDGARGIVTVSRRLDYEITSAYQLTVNATDQDKLRPL
SSLANLAITLSDIQDMDPIFTNLPYSTNVEEEAPLGFEVRKIRAIDQDLGKPRGIGYTVV
SGNTNSVFALDYISGSLTVNGRLDRENPLYASGFSLTVKGTELNDDRTPSSATVLTTFTI
LLIDKNDNAPKFNSSEYRVRITELVQVGFALPLSIQVEDKDEGVNSMFEVILMGNNSDHF
SISPTSVQGRADIRVRVAVPLDFETIRSYSFSLYANESVAEHVGFARVFIDLFNENDNRP
IFSQTLYNISLLESTAPGTSLLRIQATDNDFGTFGVVRYYFSDEPDQFSLDPETGWVTLR
SRLDYELTRRFTLTILARDGGGEETTGRLRVNVMDINDNAPVFQKDAYSGSLMENQQVAQ
QVTRVRATDEDSPPNNVLTYSIIYASQFRSFFSITMVEGYAVITVNRPLDYEQVPGGMIY
LTLMAQDGGDPALNSTVPITMELFDENDNPPEFSQSSYIVRVSENMVAGATVLFVTATDL
DASREFGQASLIYSLQGPSEFRLNTRSGEITTTALLDREVKSEYILIVRAVDGGVGPLQK
TGIATVNITVLDINDNAPMWQDEPYLANVVEMSPVNTDVISVLALDADNGDNGTVVYSIS
PANPYYIINNRTGKIRTSGAVLDRESVDPRAAQLMRTIIISATDRGNPPLRSSASTTVYV
NLLDLNDNDPTFLNLPFVAEVPEGLPTNSSVFRVQVQDPDEAENGVVTLALQLGLPRLDF
RLNSSTGVLFSTVVLDRERIAQYQLRLVAFDSGQYPRTSTSTLTITVLDMNDETPTFFPR
LYNVSVLESVPRDFVVARLNCSDNDAGLNAELSYFITGGNQDGKFSVGFRNGVVRTVVDL
DRETQGSYTLVIEAIDNGPAGDRKTGTATVYVEVLDVNDNRPIFLQNSYETTILENVPRG
TSVLQVQATDADQGENGRVLYRILSGNSGGQFSIDLLSGLITRGQRALDRETSSSHLLEV
EAYNSDQGSMRSSVRVIVYVEDVNDERPVFTQQQYNRLGLRETAGIGTSVIVVRATDPDT
GDGGAVSYALISGSDRKFEVDISTGLVTTVDYLDYETKTSYLMNVSATDQSPPFNRGFCT
VYVTLLNELDEAVSFMMAGYETSLRENIAGGTEVIQVRAQSADNLNQLTYRFDPDTSPAA
LALFKIDAVTGRITVTGLIDREKGDSYTLTVVADDGGPKRGSTVKVSITILDENDNSPEF
DLTSDLTVNVPEDTPIGQRVAMVTARDKDAGRNGLVNFTLVAGNMRDIFEIRTINNTFGD
IYVNAALDREAVDRYLLKVRAIDNGSPPRFTDHSLTVNIVDVNDNAPVIQSPRGYNVSVS
ENVGGGTSVLRVVATDRDIGPNAVLSYYITNGNQDLTFRMDRMSGEIVTRPSPPDRERQQ
QYTLTVTVEDDGTPPLSTSTTVWVYIIDENDNAPAFAAKEYVTILTEGPDTVGATIATVT
ASDPDEGLNGTLRYAITLGNVAQTFSISPTTGRITVMREVDYEISSGRYTLIITATDQCP
IPQLRLTASATVLVNVIDVNDVTPQFPRPFEGPFEITEGQPGPRVSILKAVDEDSGLNGK
VEYSITAGDPNNEFIVSPVEGELRVRRDVELDRETTAYYNITVTAKDLGTPPRSSTVIVG
VVVLDINDNDPILLNLPLNTSVSEGASVQTSIARVRAQDIDSGRNALLTFTITAGNPDGA
FYINETSGVVQVNRPLDRERVAEYTLTITVKDNPENSRIARRDSEILVVSIVDVNDNRPI
FTSSSYRGEISENSPTGTTVLILNGPVLATDRDIGPNAVVKYGLIGPRVDLFTINPTTAV
VSVREGAMLDREAFFDPRVELFLVSEDIGGLNSSVPLTITILDRNDNPPVFSPSSFTVRL
PENSPTGVVVTQLSATDADAGSNGWLQYRLESGAQDRFVVDTVSGAVLVGNASLDREERG
SYRLVVIATDRGSPSLSGTATLTVVLDDVNDSRPRFLQPVQTISVNESTPPGEVVATLAA
EDPDLRPRLEYYIISVEARDDGNNQVRGLQDSFGIDFHTGAVFVRNPLNRELVATFEIIV
SVHDNASDIIDMSVSVPNARLTISVLDVNDNTPRFRPFGVTNFSESILEGAQPGTTLLSV
SAVDPDKGPNGQIFYELLNLPRGGYIRLEDPSTGKIIANRTVDYEQVNWLNFTVRVQDRG
SPPRSSELPVYLRIVDVNDNNPVFTQPSYQRPVFEDVALGTIIVRVSATDADSGLFAVIE
YGLVDGEGKFGITPSTGDIYILSPLDRETKDHYTLTAVARDNPGGSPNNRRENSVQVLVT
VLDVNDFRPRFSERVFSTTVFENEPSGTSVITLSATDLDEGENALLTYSLQGPGANAFSL
DPDTGLIRSLRLLNSFERFNLTVVATDHGRPPLWGTALLQITIVDVNDNRPVFVRPANGT
IMHILEEQPPGLVVYEVFATDEDEGVNGEVRYSFLQTGAGNRDWENFRIDSITGVITTAV
KLDREKQALYSLIVVAYDLGQPVPYETTQPLQVALSDIDDNEPVFLKPPRGGLLFQSISV
PEHSPSGTVVGNITGAVDADEGSNAVVYYFIAGGDTEGNFGLSVTGVLRVKKDLDREEIS
VYSIIVKASSNRNWTPPRGQRSQRNRVALDPSRDPTLQEVRIYLEDINDQPPRFTKLEYT
AGVAADAKVGSDLIQVQAIDNDIGNNSLVLYHILSIRYIKLQSNESEDIGNVFIIGETDG
IIRTFDLFTAYDPGYFVVEVLARDLAGHSDVALVGIYILRDDQRVKLIINEIPERVWLFQ
EEFINLLSNITGAIVNMDDVQFHVDKKGRVNFAQTDVLIHVVNKQTNRILDVERVIQMID
ENKEQLRNLFRNYNILDVQPAVSGRAPDDLTTLQMAIIILAVLLFLAAMLFIFMNWYYRT
VHKRKLKAIVAGSTGNQGLMDILDMPNTNKYSFEGANPVWLDPFCRNMELAAQAEHEDDL
PENLSDIADLWNSPARTHGTFGREPQASKPEDDCYLRAAIQEYDNIAKLGQIMREGPIKG
SLLNVVLDDYLRLKKLFAARLVTKSTSQDRSSITELVQSDLDDDDDERMSIGGRGTLRFK
HKHPVELRGPDGVHVVHGSTGTLLTSDLNSLPEDDQRALARSLEALHADGTLYAERNART
ESAKSTPLHRKGGNSLSESPLEITEL
NT seq
9801 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcggaaatgcaggtggcgttttctgtcagtgacagtcaaggggtggtgaaggac
accgtgaacatccagatcggagacgtgaatgacaactcgccgactttccataaccagcct
tatactctgaatataccagaggacacgcctgtaggaacgtcaatcttcatggtcaatgct
acagatccggaccaaggcacagggggaagcgtgcttttctctttccagcctccatctcca
ttcttctcaattgacggagcccgaggaatcgtcactgtgtcaagacgtctagattatgaa
attacaagtgcctaccagctcactgtcaatgccacggaccaggacaaacttcgtcctctc
tccagtctggctaacttggccatcactctctctgacattcaggacatggaccccatcttt
accaacctgccctacagcaccaatgtagaggaggaagcaccgctgggttttgaggtgcgt
aagatcagagcgattgatcaggatctgggcaaacctcgaggcatcggatacaccgttgta
tcaggcaacaccaacagtgtgtttgctttggactacatcagcggatcgttgacggtgaac
ggccgactggacagagagaacccgctgtatgcttcaggattctcgctcacagtcaagggg
acagagctgaatgacgaccgtacgccctcctcggcgaccgtcctcacaaccttcaccatc
ctgctcattgataagaacgataacgcacccaagtttaacagctctgagtaccgggtgcgc
atcaccgagctggtccaagtggggtttgccttgccgctgtctatacaggtggaggacaag
gacgagggagtgaacagcatgtttgaggtgatcttaatgggaaacaactcagatcacttc
tccatctcccccacatcagtacagggacgagctgatatccgcgtgcgggtggctgtgcct
ctggactttgagactatcagaagctacagcttttctctgtatgccaacgaatctgtagcg
gagcacgtgggcttcgctcgggtcttcatcgatctgttcaatgagaacgacaacaggcct
attttcagccaaacgctgtataacatcagtttactggagagcacagcacctggaacgtca
ctactgaggatacaagccacagataatgattttggcacttttggcgttgtgcgctactac
ttcagtgacgagcctgatcaattctcactggaccccgagacgggatgggtgaccctcagg
agtcgtctagattacgagttgacgcgtcgcttcaccctgacgatcttggctcgtgacgga
ggtggagaagagaccacaggacgtctccgcgtcaacgtgatggacataaatgacaacgct
cctgtctttcagaaggacgcttattccggctcactgatggaaaaccagcaagttgctcaa
caagtgacccgtgtgagggcgaccgatgaagactctcctccaaacaacgtcctgacctac
tccatcatctacgcctctcagttccgcagtttttttagcatcaccatggtggagggctac
gcagtgatcacagtgaacagacctctggactacgaacaggttcctggtggaatgatatac
ctgacactgatggcacaagacggaggagatccggccttaaacagcaccgtacccatcacc
atggagctgtttgacgagaacgacaatcctccagagttcagtcaatcctcgtacattgta
cgggtctctgagaacatggttgcaggggcgactgtgttatttgtgacggcaacagatttg
gatgcatccagagaatttggccaggcctctctcatctactcactgcaggggccttctgag
ttcagactgaacacacgctcaggagagatcaccaccacagctctgctggatcgtgaggtg
aagtctgagtacattctcatcgtgagagctgtggatggaggagtgggacctctgcagaaa
actggcatcgccacggtcaacatcactgtcctggatattaatgacaacgcccccatgtgg
caggatgagccgtatctggctaacgttgtggaaatgagtccagtcaacactgacgtcatc
tctgtcctggccctggatgctgataatggagataatgggacagtcgtgtacagtatcagt
ccagcaaacccctattatatcatcaacaacagaaccgggaagatccgcaccagtggcgcc
gtgctggacagagagagcgtggatccccgagctgcccagctcatgcggaccatcatcatt
tcagctactgatcgtggaaacccaccactgcgctcctcagccagcactacggtctacgtc
aatctgctggaccttaacgacaacgatcccaccttcctcaaccttccattcgtcgccgag
gtgccagagggtcttcctaccaactcgtctgtcttcagggtgcaagtacaggacccagat
gaggcggagaatggggtcgtgacattggctctgcagctgggtttacctcgtctggacttc
cgcctcaacagcagcacaggtgtgctattttctacagttgtactggaccgtgagcggatc
gcacagtaccagctgcggctagtggctttcgactcagggcaatacccacgtacctccacc
agtaccctcaccatcacagtgttggacatgaatgacgagactcctacgttttttccacgc
ctgtacaatgtgtcggtgttggagagcgttccacgggatttcgtggtcgcacggctcaac
tgttctgataacgatgctggccttaatgccgaactcagctatttcatcacaggtggaaat
caggatgggaaattcagtgtgggcttcaggaacggtgtggtgcgcactgtggtggatctg
gaccgagaaacacaaggatcatacacactcgtcatcgaagctatcgataacggtccagct
ggcgacagaaaaacaggcacagctacagtctatgtagaagtgctggatgtcaacgacaac
agacccatcttccttcagaacagctacgagactactattctggagaacgtcccgagagga
accagtgtactacaggtccaggccacagatgcagaccagggagaaaatggcagggttctg
taccgaattctctctggtaacagcggtggacagttcagtatagaccttctgtctggcctg
atcacccgaggacaacgagctctggacagagagacgagcagctcacacctgctggaggtg
gaggcctacaacagtgaccaaggcagcatgcgcagctctgtcagggtgatagtgtatgtg
gaggatgtgaatgacgaacgtcccgtgttcacccagcagcagtataacagactcggcctg
agagaaacagccggaatcggcacctctgtgatcgtggtacgagccactgatccagacacc
ggagatggaggtgctgtatcctacgcccttatctcgggttcagaccgtaaatttgaggtg
gacattagtacaggactagtgaccaccgtggattaccttgactatgagaccaagaccagc
tacctaatgaacgtgtcagccacagaccaatcgcctccctttaatcggggcttctgtact
gtatatgtcactctgctgaatgagctggacgaggctgtgtcattcatgatggccgggtac
gaaacgtccctgagggaaaatatagctggcggaacagaagtgatccaagtgcgagctcag
tcagcagataatctgaatcagctgacgtatcgcttcgaccccgatacgtcacccgccgct
ctcgcactcttcaagatcgatgctgtcacgggtcgaatcactgtgactggtctgatagat
cgagagaagggagactcctacactctcacagtggttgctgatgatggaggacctaaaaga
ggatcaactgtgaaggtgtccattactattctggacgagaatgataacagccccgagttc
gacctcacgtcagatttaaccgttaatgttccagaggatacacccattggtcagagggtg
gccatggtgacggcacgggataaagatgccggaaggaacggactggtgaactttacactg
gtggcagggaacatgagggatatatttgagatccgaaccatcaacaacacgtttggagac
atttatgtaaatgctgctcttgaccgagaagcagtggaccgttatctgctgaaggtgcgg
gccatagataacggctctcctcctcggtttacggatcattctcttactgtgaatattgtg
gacgtaaacgacaatgctcctgtcatccagagccctcgtggctacaatgtcagcgttagt
gagaacgtaggtggtggtacgtcggttctgcgtgtcgtcgctacagatcgagacatcggg
cctaatgccgtgctgtcatattacatcacaaacgggaaccaagatttgacgttccgcatg
gaccgcatgagcggagagatcgtgaccagaccttcacctcctgacagagagagacagcag
cagtacacactcactgtcacggtggaggatgacggaacaccgccactatcgacctccacc
acagtgtgggtttatataattgatgagaatgacaacgccccagcttttgctgcaaaagag
tacgtaaccattctcactgagggccctgacacggtaggagccaccatcgctacggtaaca
gcctccgaccctgacgaaggattgaatgggactctgcgctatgccatcaccttgggcaat
gtggctcaaacgttcagcatcagcccaaccacgggccggataacagtgatgagagaggtg
gattatgagatcagtagtggacgctacacactgatcatcactgctactgatcaatgtcca
ataccgcagctcagattgacagctagtgccactgtgctggtgaatgtgatcgatgtgaat
gacgtgaccccacagtttccaaggcccttcgagggcccttttgagatcacagagggccag
ccggggcctcgagtcagcatactgaaggctgttgatgaagactcaggtcttaatggaaaa
gtggaatacagcatcacagccggagaccccaacaatgagtttatagtgtctcctgtggag
ggagaactgagagtcagaagagatgttgaactggacagagagactacagcttattataac
atcacagttactgctaaagacctgggaacacccccacgtagcagcacggtgatcgtgggt
gttgttgtactggatattaatgataacgaccctatattactgaacttgcccctgaacacc
agtgtgagtgaaggagcatctgtccagacctccatcgcacgggtgcgagcacaggacatc
gacagtggacgcaatgctctcctaacattcaccatcacagcgggcaatccagatggagct
ttctacatcaacgaaacttcaggtgtggttcaggtgaacagacccttggacagagagaga
gttgcagaatatacactgactatcacagtgaaggacaacccagagaactcacgtattgct
cgaagggactcagagattctggtggtctccattgtggatgttaatgacaacaggccaatc
ttcacatcgtcaagctacagaggagagattagtgagaattcgcccacgggtaccactgtg
ctaatcttgaatgggcctgttctggctacagacagggatattggacccaatgctgtggta
aaatatggcctgattggcccaagggtggatcttttcaccatcaaccctacgacagctgta
gtgtcagtgcgtgagggtgccatgttggacagggaagccttttttgatccacgagtggaa
ttgttcttggtcagtgaagacattggtggtctaaacagcagtgttcctctcaccatcacc
atcctggacaggaacgacaatcctccagtgttcagcccttccagcttcacagtgcgtctg
ccagaaaacagtcctactggtgtggtagtgactcagctctcggccacggatgccgacgca
ggctccaacggttggttgcagtaccgtttagagagtggtgctcaggaccgtttcgtggtc
gataccgtctcaggtgctgtccttgtaggcaatgcctcacttgaccgcgaggagcgtggc
tcataccggctggtcgtcattgcgacagatcggggctcgccatcactctcaggcacagcc
acattgaccgttgttttggacgacgtaaatgactctcggcctcgtttcttgcagcctgta
caaactatcagtgttaatgagtcaacacctcctggcgaagtggtggccacattagctgct
gaggaccctgacctccgaccccgtttggagtattatattatctctgtggaggcgagagat
gatggaaataaccaggtgcgcggtctgcaggactcatttggtatcgactttcacacaggc
gccgtatttgtacgaaaccctttaaacagagagctggtagctacttttgagatcatagtg
tcagtgcatgacaacgcgagtgacattattgacatgtcagtcagcgtgcccaatgccaga
ctgaccatcagcgtgctggacgtgaacgacaacactccccgtttccgtccattcggggtc
accaacttctccgaaagcattctggaaggagctcaacccggcaccactctgctctcagtg
tccgccgtcgatccggacaaaggcccaaatggtcagatcttttacgagcttttaaatcta
cccagaggaggatatatcagactggaggacccttctaccggtaagattatcgccaaccgt
acagtggattacgagcaggtaaactggttgaacttcacggtgcgcgttcaggatcggggc
agtccaccgcgctcgtctgaacttcctgtttatctacgtatcgtcgatgtaaatgacaac
aaccctgtcttcacccagccgtcatatcagaggccagtatttgaggatgtggctctgggc
accatcattgtgcgagtgagtgctacagacgcagactcgggactgtttgccgtgatagag
tacgggctggtggacggagagggcaagtttggaatcactccatctacaggggacatctac
atcctgtctccactggatcgagagactaaagaccactacacacttactgctgtagccagg
gacaatcccggaggtagccccaacaaccgccgggaaaattcagttcaggtcctggtgacg
gtgctcgacgtgaatgatttccgaccacgattctcagagcgtgtattcagcaccaccgtg
tttgagaatgagccgagcggcacgtctgtgatcactctgtcagctacagacctggacgag
ggagagaatgccctgctcacttacagcctacaagggcctggagccaatgcgttctctcta
gatcccgacactggtctgatccgttctctgcgtttgctgaacagttttgagaggtttaac
ctgacagtcgtggcgacggatcacggtcgtccgcctctctggggcacagcgcttctccag
atcaccatcgtcgacgtaaatgacaacagacccgtctttgtcagaccggccaacggcacc
atcatgcacatcctcgaggagcagccgccgggtctggtggtgtatgaggtgtttgcgacg
gatgaggatgaaggtgtgaatggagaggtacgttatagtttcctgcagaccggagcagga
aaccgggactgggagaatttccgtattgactccatcaccggcgttatcaccaccgcggtt
aaattggatcgagaaaagcaggcactctatagcttgattgtggtagcttatgacctcggg
cagcctgtgccgtatgagacgactcagcctctgcaggtggctctgtctgatatcgatgac
aatgagcctgtattcctcaaaccaccgagaggtggtctgttgtttcagtctatttctgtc
cctgagcactcaccctctggcacagtggtgggcaatattacaggagcggtggatgcagat
gaagggtccaatgctgtggtttactatttcattgcaggtggtgacaccgagggaaacttt
ggattgagcgtgacaggagttttgcgagtgaaaaaggacctggaccgagaggaaatctcg
gtgtactctattattgtcaaagcctccagcaacaggaactggacaccaccgagaggtcaa
aggtcacagcgaaaccgtgttgcgcttgacccgagccgtgacccgaccctacaggaagtc
cggatctacctcgaagacatcaacgatcagccgccgaggttcaccaagctggagtacact
gcaggtgtagcagcagacgctaaagtcggttcagatcttattcaggttcaagccatcgat
aatgacatcggcaacaacagcctcgttctttatcacatcctgtccatccgttacatcaaa
ctgcagtcgaacgagtcagaggacatcggcaacgtcttcatcatcggcgagacagatggt
ataatccgaacgttcgacctcttcaccgcctatgatccggggtattttgtggtggaagtg
ttggcacgtgacctggcaggacacagtgacgtggcactggtgggcatctacatcctgaga
gacgaccagagagtgaagctcatcatcaacgagatccctgaacgtgtctggctcttccag
gaggagtttattaacctgctctcgaacatcacaggggccatagtcaacatggacgacgta
cagttccatgtggataaaaaaggcagagtaaactttgctcaaaccgatgttctgattcac
gtggtcaacaaacagaccaaccgcatcctggacgtggagagggtcattcagatgattgac
gagaataaagaacagctgagaaatctgttcaggaactacaacatcctggatgtccagcct
gccgtgagtggacgagcccctgatgacctcactacccttcagatggctataataatcctg
gctgtgctgctttttctggctgcaatgctgtttatcttcatgaactggtattacaggaca
gttcacaagaggaagctgaaagccatagtcgctggttctacaggcaaccagggactgatg
gacatcctcgatatgcccaacactaacaagtactcgtttgagggagccaaccctgtatgg
ctggatcctttctgtcgaaacatggagctggctgctcaggctgagcacgaagatgacctg
cccgagaacctgagtgacatcgcagatctgtggaacagcccagctcgaactcacggtact
tttggtcgtgagcctcaagcctctaaaccagaggacgattgctacctcagagctgccata
caggagtatgataacattgccaagctgggacaaatcatgcgtgaggggccaattaagggc
tcgctgctcaacgtggtgttggatgattatctgagactcaaaaagctctttgctgcacgc
ctggtcaccaagtcgaccagccaagaccggtcgtccatcacggagctggtccagagcgac
ctcgacgatgacgatgatgagcggatgagcatcggaggacgaggaacgctgcgattcaag
cacaaacaccccgtggagctgcgcggcccagacggagtccatgtggtccatggcagcaca
ggcacactattgacctctgacctcaacagcttgccggaagatgaccaacgggcgctggca
cgctctctggaagctctgcacgcagacggcacactgtatgccgagagaaatgcccgcacc
gagtcggccaaatccacaccgctgcaccgcaagggaggcaactccctttcagagagccca
ctggaaatcacagagctctga
DBGET
integrated database retrieval system