Tessaracoccus flavus: RPIT_02915
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Entry
RPIT_02915 CDS
T04688
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tfl
Tessaracoccus flavus
Pathway
tfl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tfl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RPIT_02915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tfl03021
]
RPIT_02915
03400 DNA repair and recombination proteins [BR:
tfl03400
]
RPIT_02915
Enzymes [BR:
tfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RPIT_02915
Transcription machinery [BR:
tfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RPIT_02915
DNA repair and recombination proteins [BR:
tfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RPIT_02915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AQP43893
UniProt:
A0A1Q2CCP1
LinkDB
All DBs
Position
651546..655064
Genome browser
AA seq
1172 aa
AA seq
DB search
MHGNLAFKRSWKDRILAASRSALKNTNIVSSTGRLSFAKIHEPLEVPNLLDLQIDAYNWL
VGNETWRTKVEGQLAAGRTDVNTRSGLEEIFAEISPIEDFNETMSLSFRDHRFEEPKYSI
EECKDRDVTYAAPLFVTAEFVNNDTGEIKSQTVFIGDFPLMTERGTFIINGTERVVVSQL
VRSPGVYFEQTPDKTSDKDIFTCKVIPSRGAWLEFEIDKRDMVSVRLDRKRKQNVTVLLK
ALGWSEDKILEEFGDYESMRLTLEKDTVKTQDEALLDIYRKLRPGEPPARDAAQQLLDNY
YFNPKRYDLAKVGRYKINKKLGLELPYDQQVLTLDDIVAAIRYVVALHEHQQMLGDLPVE
ADDIDHFGNRRLRTVGELIQNQLRTGLGRMERVVRDRMTTQDIEAITPQTLINIRPVTAA
LKEFFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPI
ETPEGPNIGLIGSLASFARVNAFGFIETPYRKVENGFVTDQIDYLTADEEDRYAIAQANA
KVDSDGRLSEERVLVRMKHSDADSIPAADVEYMDVSPRQMVSIATALIPFLEHDDASRAL
MGANMQRQAVPLIRNEAPIVGTGMEYRAAVDVGDVTLAAKPGVVTAVSADILEITNDDGT
YSSYKLDKFVRSNAGTCINQRPLVGPGDRVEVGTPLADGPCTDQGELALGKNLLVAFMPW
EGLNYEDAIILSQRIVQDDVLTSIHIEEHEVDARDTKLGAEEITREIPNVSDEMLADLDE
RGIVRIGAEVSAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGT
VIGVRVFNREDDDELPPGVNQLVRVHVAQKRKISDGDKLAGRHGNKGVISKILPVEDMPF
LEDGTPVDIVLNPLGVPSRMNLGQVLENHLGWIAKTGWDVTGVKEEWAERLRDVGLGRVE
GDARVASPVFDGADAHEISGLLEHSLETRDGDRLIDGSGKARLFDGRSGEPYPEKIGVGY
MYMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAWALQE
LLTIKSDDVPGRVKVYEAIVKGENIPEPGIPESFKVLVKEMKSLCLNVEVLSDDGRVIDL
RESEDDIRSAEDFGIDLGRRPGSDNFLDVGEV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaaacttggcatttaagcgttcttggaaggaccgaatcttggccgcctcgcgc
tctgcgttgaagaacaccaatatcgtctcgtccaccggccgtctgtcgttcgcgaagatc
cacgagcccctcgaggtacccaacctcctggatctccagatcgacgcgtacaactggctg
gtcggtaacgagacctggcgaacgaaggtcgagggtcaactggccgcgggccgcactgac
gtcaatacccgctccggactcgaggagatcttcgccgagatctctcccatcgaggacttc
aacgagacgatgtccctctcgttcagggaccaccgcttcgaggagccgaagtactcgatc
gaggagtgcaaggatcgcgacgtcacgtacgccgccccactcttcgtcaccgccgaattc
gtcaacaacgacaccggtgagatcaagagccagaccgtcttcatcggcgatttcccgctc
atgaccgagcgtggcaccttcatcatcaacggcaccgagcgtgtcgtcgtgtcccagctc
gtgcgctctcccggcgtctacttcgagcagaccccggacaagacctccgacaaggacatc
ttcacctgcaaggtgattccgtcgcgcggcgcgtggctcgagttcgagatcgataagcgc
gacatggtgtcggtgcgcctcgaccgcaagcgcaagcagaacgtcaccgtgctgctgaag
gccctgggctggagcgaggacaagatcctcgaggagttcggcgactacgaatcgatgcgc
ctgacgctcgagaaggacaccgtcaagacccaggacgaggcgctcctcgacatctaccgc
aagctgcgtccgggcgaaccgccggcacgcgatgcggctcagcagttgctcgacaactac
tacttcaaccccaagcgctacgacctcgccaaggttggccgttacaagatcaacaagaag
ctcggtctcgagctgccctacgaccagcaggtcctgacgctcgacgacatcgtcgcggcc
atccgctacgtggtggcgctccacgagcaccagcagatgctgggcgatctgcccgtcgag
gccgatgacatcgaccacttcggcaaccgtcgcctccgcaccgtcggcgagctgatccag
aatcagctgcgcaccggtctgggacgcatggagcgggtcgtgcgcgatcgcatgaccacg
caggacatcgaggcgatcaccccgcagacgctgatcaacatccggcccgtcaccgcggcc
ctcaaggagttcttcggcacttcgcagctctcccagttcatggatcagaacaacccgctc
gcgggcctgacccacaagcgtcgtctgtccgcgctcggccccggtggtctgtcgcgtgac
cgcgccggcatggaggtccgtgacgtccacccgtcgcactacggccgcatgtgccccatc
gagacccctgaaggcccgaacatcggcctcatcggctcgctggcgtccttcgcccgggtc
aacgcgttcggcttcatcgagacgccgtaccgcaaggtcgaaaacggtttcgtcaccgat
cagatcgactacctcaccgccgacgaggaggaccgctacgcgatcgcccaggcgaatgcg
aaggtggactccgacgggcgcctctcggaagagcgcgtgctcgtccggatgaagcacagc
gacgccgactcgatccctgcggccgacgtcgagtacatggacgtttctccgcgccagatg
gtgtccatcgccaccgcgctgatcccgttcctcgagcacgatgacgcctcccgcgccctg
atgggcgccaacatgcagcgccaggcggtgccgctcatccgcaacgaggctccgatcgtc
ggcaccggcatggagtaccgcgccgcggtcgacgtcggcgatgtgaccctggccgcgaag
cccggtgtcgtgacggccgtgtcggccgacatcctcgagatcaccaacgatgacggcacc
tactcgtcgtacaagctcgacaagttcgtgcgctccaacgcgggcacctgcatcaaccag
cgaccgctggtcggtccgggcgaccgtgtcgaggtgggcaccccgctggctgacggcccc
tgcaccgatcagggcgagctggcgctcggtaagaacctcctcgtggcgttcatgccgtgg
gagggcctcaactacgaggacgcgatcatcctctcgcagcgcatcgttcaggacgacgtg
ctgacctcgatccacatcgaggagcacgaggtcgacgcccgcgacaccaagctgggcgcc
gaggagatcacccgtgagatccccaacgtctccgacgagatgctcgcggacctcgacgaa
cgcggcatcgtccgcatcggtgctgaggtctcggccggagacatcctcgtcggcaaggtc
acgcccaagggcgagaccgagctgacccctgaggagcggctgctgcgcgcgatcttcggc
gagaaggcgcgcgaagtgcgcgacacctcgctcaaggtcccccacggcgagtccggcacg
gtcatcggcgttcgggtgttcaaccgcgaagacgacgacgagctgcctccgggtgtgaac
cagctggtgcgggtccacgtcgcgcagaagcgcaagatctccgacggcgacaagctcgcc
ggccgccacggcaacaagggcgtcatctcgaagatcctgccggttgaagacatgccgttc
ctcgaggacgggacccccgtcgacatcgtgctcaacccgctcggcgtgccgtcgcgaatg
aacctcggccaggtgctcgagaaccacctcggctggatcgccaagaccggctgggacgtc
acgggcgtcaaggaagagtgggccgagcgcttgcgcgacgtcggcctcggccgcgtagag
ggagacgcccgagtggcgagccccgtcttcgacggtgccgacgcacatgagatctcaggt
ctgctggagcactcgctcgagacccgcgacggcgatcgactgatcgacggcagcggcaag
gcgcggctcttcgacggccgctccggcgagccgtacccggagaagatcggcgtcggctac
atgtacatgctcaagctgcaccaccttgtcgacgacaagatccacgcccgctccacgggg
ccctactcgatgatcacgcagcagccgctcggcggtaaggcccagttcggcggccagcgc
ttcggtgagatggaagtgtgggctctggaggcgtacggcgccgcctgggcgctccaggag
ctcctgacgatcaagtcggacgacgtccccggacgcgtgaaggtctacgaggccatcgtc
aagggcgagaacatccccgagcccggcatccctgagtccttcaaggtgctggtcaaggag
atgaagtcgctctgcctgaacgtggaggtgctctccgacgacggccgcgtcatcgacctg
agggagtcggaggacgacatccgttccgccgaggacttcggcatcgacctcggtcgtcgt
ccgggtagcgacaacttcctggacgtcggcgaagtctga
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integrated database retrieval system