Takifugu flavidus (sansaifugu): 130534595
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Entry
130534595 CDS
T09160
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
tfs
Takifugu flavidus (sansaifugu)
Brite
KEGG Orthology (KO) [BR:
tfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tfs03016
]
130534595 (tyw1)
Enzymes [BR:
tfs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
130534595 (tyw1)
Transfer RNA biogenesis [BR:
tfs03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130534595 (tyw1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Lipoprotein_16
DUF4064
DUF7027
Motif
Other DBs
NCBI-GeneID:
130534595
NCBI-ProteinID:
XP_056904884
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Position
12:complement(2328162..2342661)
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AA seq
763 aa
AA seq
DB search
MQGSSRVLFSLSNLTSFVTMFCVFAIVFLLIHHAFSSDSKEQQKSHISADYFMAIWHNRL
YLYSTAALIFGIWFSLKMAIKKKNQVSNANSLAYKPVKKNDNDSMVHVSGVKIFYGSQTG
TAKGFAKELSDEIKALGIPAVVLDMKDYDPDDELAVECTNKSVCVFLVATYTDGQPTENA
EWFCKWLEEASTDFRYGKTYLKGLRYAVFGLGNSVYDGHYNTVGKNVDKWLWMLSGKRIM
TRAEGDCNVVKSRNGSVQADFLAWKVKLLKRLQALARGEKKICSGNCKTEGKCKNKRKVK
GEENAALQNNSSEGELIESSSDEEESGLQEEKQSGTMLDMEDLGNIMNLVNKTKSNENGR
GKGQTVKLSKLNGLKKTEEEEDVREMITPALREALTKQGYKLIGSHSGVKLCRWTKSMLR
GRGGCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKILQDA
LEKHQNMIRQFRGVPGVKLERYEEGLQVKHCALSLVGEPIMYPEINTFVRLLHTHNISSF
LVTNAQFPQEIRSLVPVTQLYVSVDASTKDSLKKIDRPLFKDYWPRFLDSLRALGEKRQR
TVYRLTLVKAWNVEEMLAYSELIALGQPDFIEVKGVTYCGESSASSLTMANVPWHQEVVA
FVQQLADMLPQYEIACEHEHSNCLLIAHTKFKVDGEWWTWIDYERFQDLVGIYEKTGGQR
SFSALDYMAKTPSWAVFGAQEQGFDPADTRFQRRNKTKDISGC
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaagttccagagttctctttagtctttcaaatttaacgtcgtttgtaacaatg
ttttgtgtctttgcgattgttttcctgctcatacatcatgcattttcttcggatagtaaa
gagcaacagaagagccacatcagtgcagactactttatggcaatatggcacaacaggctc
tatttatattcaactgccgcacttatcttcggaatttggttttcattgaagatggcaata
aaaaagaaaaaccaagtcagcaatgccaactccttggcttacaaaccagtaaagaaaaat
gataatgactctatggttcatgtgtcaggagtgaaaattttctatggttcacaaactgga
acagcaaagggctttgcaaaagagctgtcagatgaaatcaaagctctaggtataccagct
gtggtgcttgatatgaaagattatgatccagatgatgagcttgctgttgagtgcaccaac
aagtcggtctgtgtgtttcttgtggccacctacactgatggacagcccacagaaaatgca
gaatggttctgcaagtggttggaggaggcatctactgacttcagatatgggaagacctac
ctgaaaggcctgagatatgctgtgtttggtcttgggaactctgtctatgatggacactat
aatacagttggtaaaaatgttgacaagtggctgtggatgctgagtggaaagcgaatcatg
accagggcagagggtgactgtaatgtggtaaagagccgtaatggcagtgtccaggcagac
tttttggcctggaaggtcaaattgttgaagcgccttcaggctctggccaggggtgaaaag
aagatctgcagtgggaactgtaagactgaaggcaaatgtaagaacaagaggaaagtgaag
ggggaagagaatgcagctctgcagaataacagctctgagggtgaactgatagagtccagc
agtgatgaggaggagtctggcctgcaagaggaaaaacaatcaggaaccatgcttgacatg
gaggacctaggcaacatcatgaaccttgttaataaaacaaagagcaacgagaacggtcga
ggaaagggtcaaacggtgaagctgtccaagttaaatggattgaagaagacggaagaggaa
gaggatgtcagagagatgatcacacctgctctaagagaagcactgacaaagcaagggtac
aaactaattggaagtcactcaggagtaaaactgtgtcgttggaccaagtctatgttgcga
gggagagggggctgttacaaacacactttctacggcattgagtcccaccgatgcatggag
acgacccccagcctcgcctgtgccaacaagtgcgtcttctgctggaggcatcacaccaac
cctgtggggaccgagtggcgctggaagatggatcctgcagagaaaatcctgcaagatgcg
ctggagaagcaccaaaacatgattcgccagttcagaggtgtccctggagtgaagctggag
cggtatgaggaggggctgcaggtcaaacattgtgccctctctcttgtgggcgagccaatc
atgtaccctgaaatcaacaccttcgtccgcctcctccacacccacaacatctccagcttc
ctggtcaccaatgcacagttcccacaggaaatcaggagtttagtgccagttactcagctg
tatgtcagcgtagatgccagcaccaaagacagtctgaagaagatcgaccggccgcttttc
aaggactactggcctcgtttcctggacagcctgagggcccttggtgagaagagacagagg
acagtttacagactgaccctggtcaaggcctggaacgtggaagagatgctggcctattca
gagctcattgctctgggccagcccgattttattgaagtcaagggagtgacgtactgtggg
gagagctctgccagcagtctgaccatggccaacgtcccctggcaccaggaagtggtggcc
tttgtccagcagctggctgacatgttgcctcagtatgagattgcctgtgaacacgagcac
tccaactgtttgcttattgcacacaccaagttcaaagtggacggcgagtggtggacgtgg
atcgactacgagcgcttccaggatctcgtcggcatttacgagaagacgggaggacagcgg
agcttctcagccctcgactacatggccaagactcccagctgggctgtgtttggagctcag
gaacaaggtttcgacccagccgacacgcggttccagcggcggaacaaaaccaaagacatt
tcaggatgctga
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