Taeniopygia guttata (zebra finch): 100217739 Help Entry 100217739         CDS       T01082                                  Symbol CDH23 Name (RefSeq) cadherin-23 isoform X1   KO K06813   cadherin 23 Organism tgu  Taeniopygia guttata (zebra finch) Brite KEGG Orthology (KO) [BR:tgu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:tgu03037]     100217739 (CDH23)    04515 Cell adhesion molecules [BR:tgu04515]     100217739 (CDH23) Cilium and associated proteins [BR:tgu03037]  Primary cilia and associated proteins   USH complex and associated proteins    100217739 (CDH23) Cell adhesion molecules [BR:tgu04515]  Cadherins   Major cadherins    100217739 (CDH23) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Motif Other DBs NCBI-GeneID:  100217739 NCBI-ProteinID:  XP_030131496 Ensembl:  ENSTGUG00000004184 LinkDB All DBs Position 6:complement(2016811..2206377) Genome browser AA seq 3157 aa AA seqDB search MKHPVAAAASFLPLLLLLELVSPGQGNRLPYFINYFFDTYLLINEDTPVGSSVTQLLARD LDNDPLVFGVVGEEASRFFAVESVTGVVWLRQPLDRETKSEFTVEFSVSDSQGVIKGTVN IQVGDVNDNAPQFHNQPYSVRIPENTPVGTPIFIVNATDPDQGAGGSVLYSFQPPSSFFA IDSGRGIVTVIRELDYEVTQAYQLQVNATDQDKNKPLSTLANLAVIITDVQDMDPIFINL PYSTNIYENSPPGTTVRMITAVDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGPL DRENPFYSAGFILTVKGTELNDDRTPSNASVTTTFNILVIDINDNAPEFNASEYSVAIPE LAQVGFALPLFIQVQDKDEGPNSVFEVYLVGNNSNHFIISPTSIQGKADIRVRVAVPLDF ETIPRYEFSLFANESVPDHVGFARVKINLINENDNRPVFSKVLYNVSLFENTTVGTTVLQ VHATDNDVGTYGKVSYFFSDDPDRFSLDKDTGVIILTARLDFETTQRYTLTVIARDGGGE ETTGRVRINVLDVNDNVPTFQKEAYLGALRENEPSVTQVVRLRASDEDSPPNNQISYSIV QASAFRDYFDITMSEGYGVIIVNHPLDYEQVANGVIYLTVMAKDAGNPPLNSTVPVTIEV FDENDNPPTFSKPSYVIAVMEDIMAGATVLFLNATDMDRSREYGQESIIYSLEGSSHFRI NARSGEITTTSLLDREAKSEYILIVRAVDGGVGHHQKTGIAMVNITLLDINDNYPTWKDE PYFINLVEMTPPNSDVTTVVAVDPDLGENGTVVYSIRPPNKFYSLNSTTGKIRTSGVLLD RENPNAQEAQLMRRIVVSVTDCGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFVAEIAE GLPAGSSVFQVVAIDLDEGPNGQVSYRMQVGMPRMDFLINSTGGLVTSTAVLDRERIPEY FLRVVASDAGTPAKSSTSTLTVKVLDVNDENPTFFPAVYNVSLPEDVARDFKVVRLNCTD ADIGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVSLDRETVASYTLILEAIDNGPSGNR RTGTATVYVTVLDVNDNRPIFLQSSYEVSVPEDIPAASSIVQVKATDADEGINGRVWYRI VKGNEHNHFRINPSTGLVMRGVRHLDREQNSSHVLEVEAYNTEQGPMRSSVRVIVYVEDV NDEVPVFTQRQYNRLGLRETAGIGTSVAVVRATDRDTGNGGLVSYKIVSGAEGKFEIDES TGLITTIEYLDYETKTSYLMNVSATDQAPPNNQGFCSVYVSLLNELDEAVQFSNSSYEAV IMENIPLGSEVLRVQARSIDNLNQITYKFDPNTNPQALSLFKINGITGVITVKGQVDREK GDFYTLTVVADDGGPKIDSTVKVTITVLDENDNSPQFDITSDSSVSVAEDSAVGKRVALV LARDPDAGRNGQVTFSLTSGNIGRAFEIRTTNGTYGEVFVARPLDRELLDHYTLRIQASD GGVPPRRKEHVLRVNILDVNDNPPVIDSPFGYNVSVSENVGGGTAVAQVRATDRDIGLNS VLSYYITRGNEDLTFRMDRVTGEIATRPSPPDRERQSFYSLVVTVEDEGNPSLSATTTVY VTILDENDNAPAFRQQLYEVTLDEGPSTLNASLVTVQALDQDEGPNGTVAYAITEGNILG TFHIDNATGEIRTVKELDYEISHGRYTLIVTATDQCPIVSRRLTSTATVLVNLNDINDNC PTFPRPYEGPFDVTEGQPGPRVWTFLAHDGDSGPSGQVEYSIIAGDPLGEFVISPVEGEL RVRKDAELDRENIPFYNLTIAAQDRGVPPLSSTILVGVRVLDINDNDPVLLNLPMNLTLS ENAAVSSFVTRVLARDADQGPNALLTFDITAGNTENAFYINSTSGIVYVNRPLDRERVAE YRLTVTVKDNPENIRNARRDFDLLVISIADENDNRPLFTQGSYQAEVMENSPPGAVKIKT PLNRELVATYEVTISVHDNASEVIDRSVSVPNAKLTVNVLDVNDNTPRFRPFGVTYFTER ILEGATQGTTLISISAVDPDKGANGQITYELLNLSPEGYACLEDHSAGKVVANRTVDYEE VQWLNFTVRASDNGSPRRSAEIPVYLQIVDINDNNPVFSHPSYQKAVFEDVPLGTVILSV TATDADSGQFALIQYSLGDGEGKFGINPNTGDIYILSALDREKKDHYTLTAVARDNPGDV SSNRRENSVQVLITVLDINDVRPQFSKSQFSTSVYENEPAGTSVITMSATDLDEGDNGVV TYSIEGPGAEAFKINKDSGLVTSRRRLQSYERFNLTVVATDKGHPPLWGTTMLHIEVIDI NDNRPVFVRPPNGTILHIKEQEIPLRSNVYEVYATDKDEGLNGVVLYNLLKTGAGNKDWE YFSIDSVSGLIQTAMRLDREKQAVYNVSQPGARAGLGAVGLAWDWWDASDVVGMASAEIS HLNKNWVVIKCLRRVASWCNSTQFPVKSPQNSPASSCSLCPCLSGVSQPVWFCPGQLFCL SSQLIIVACDQGQPPYETMQPLQVALDDIDDNEPIFLRPPKDSPQYQALSVPEHSRPGTV VGNVTGAVDADEGSNAIVYYFIAAGNQESNFQLSREGKLKVLRDLDREKEPYHSIIVKAS SQRNWAPPRGQRAARTQFWDLSEDLTLQEVRIFLDDINDQSPQFTKSEYTAGVATDAKVG SELIRVLAVDADVGNNSLVLYNILGIRYIKQHSNDSEEVANIFSIGTLDGILRTFDLFTA YNPGYFVVDIMASDLVGHNDTAIVGIYILRDDQRVKIIINEIPDKVRQFEEEFISLLSNI TGAIVNTDDVQFHVDKKGRVNFAQTELLIHVVNRETNRILDVERVIQMIDENKEQLRNLF RNYNVLDVQPAITARAPDDLSALQMAIIVLAVLLFLAAMLFILMNWYYRTVHKRKLKAIV AGSTGNRGFMDIMDMPNTNKYSFDGANPVWLDPFCRNMELAAQAEHEDDLPENLSEITDL WNSPARTHGTFGREPSAAKPEDDRYLRAAIQEYDNIAKLGQIMREGPIKLIQKELEDEEE ERSPSQGSLRFRHKQPVELKGPDGIHVVHGSTGTLLASDLNSLPEDDQKVLGRSLETLTA DCGAYSDHNARTESAKSTPLHKMREVIMESPLEITEL NT seq 9474 nt NT seq  +upstreamnt  +downstreamnt atgaagcatcccgtggctgctgctgccagcttcctgcctctcctcctgctcctggagctg gtctctccaggtcagggcaatcgcctgccatacttcatcaattacttctttgacacctac ctgctgatcaacgaggacacacctgtgggttcctcagtgactcagctgctggctcgggac ctggacaatgaccccctggtcttcggggtggttggggaggaggccagccggttctttgcc gtggagagcgtcaccggagtggtgtggctcaggcagcccctggacagagagacaaagtca gaattcacagttgaattttctgtcagtgacagccaaggggtgatcaaagggacagtgaac atccaggtgggagacgtgaacgacaacgccccgcagttccacaaccagccctacagcgtc cgcatcccagagaacacccccgtgggcactccaattttcatcgtgaacgccacggaccca gaccagggggcaggaggcagcgtgctttactccttccagcccccttccagcttctttgcc atcgacagcggccgcggcatcgtgacggtgatccgggagctggactacgaagtcacccag gcctaccagctccaggtgaacgccacggaccaagataaaaacaaacccctgtctactctg gccaacctggcagtcatcatcacagacgtgcaggacatggaccccatcttcatcaacctg ccctacagcaccaacatctacgagaactcgcctccgggtaccaccgtgaggatgataacg gccgtcgaccaggacaagggacgtccccggggcatcggctacaccatcgtctcaggtaac accaacagcatctttgcactggactacatcagtggagccttaaccctgaatgggcccctg gacagggaaaatcccttctacagcgctggattcatcctcacagtgaaggggacagagctg aacgatgaccgcactccctccaacgccagcgtcaccaccaccttcaacatcctggtcatt gacatcaacgacaacgcccccgagttcaatgcctccgagtacagcgtggccatcccagag ctggcccaggtgggctttgcccttcccctcttcatccaggtgcaggacaaggatgaggga cccaacagcgtttttgaggtttacctggtgggcaacaactccaaccacttcatcatctcg ccgacctccatccaggggaaggcggacatccgtgtccgcgtggcagtgccgctggacttc gagaccattcctcgctatgaattttcgctcttcgcaaacgagagcgtcccagaccacgtt ggcttcgcgcgggtgaaaatcaacctcatcaacgagaacgacaaccggcccgtgttcagc aaggtcctctacaacgtcagcctctttgagaacaccaccgtgggcaccaccgtcctccag gtccacgcaactgacaatgacgtgggcacatatgggaaagtgagctatttcttcagcgat gaccctgaccgcttctccctggacaaggacacgggtgtgatcatcctgacagctcggctg gactttgagaccactcagcgctacaccctgaccgtcatcgcccgcgacggcggcggggag gagacgacggggcgcgtcaggatcaacgtcctcgacgtcaatgacaatgtccccaccttc cagaaggaggcctacctgggggccctgcgggagaacgagccctctgtcacccaggtggtc cggctccgggcatctgatgaggactcccctccaaacaaccagatctcctacagcatcgtg caggcgtctgccttccgcgactactttgacatcaccatgtccgaagggtacggagtgatc atcgtgaaccaccccctggactacgagcaggtggccaacggggtcatctacctgacggtg atggccaaggacgctggcaacccgccgctcaacagcaccgtccccgtcaccatcgaggtg tttgatgaaaacgacaatccccccacgttcagcaagccctcctacgtgatagccgtcatg gaggacattatggcaggagccacagtgctgtttctcaatgccaccgacatggaccggtcc agggagtatggacaggagtcaatcatctactccctggaaggctcctcgcattttcggatc aatgctcgctcaggagagatcaccacaacatctttgctggaccgggaggccaaatccgag tacatcctcattgtccgggcagtggatggaggcgtgggacaccatcagaagacaggcatt gctatggtgaacatcacgctgctggacatcaatgacaactaccccacctggaaggacgag ccatacttcattaacctggtggaaatgaccccccccaactcggatgtcaccacggtggtg gctgtggacccggacctgggggagaatggcacggtggtgtacagcatccggcctcccaac aagttctacagcctcaacagcaccacgggcaagatccgcacctcgggcgtgctgctggac cgggagaatcccaacgcccaggaggcccagctcatgcgcaggatcgtggtgtccgtcacc gactgtgggaggccacccctgagagccaccagcagtgccacagtttttgtcaacctgctg gacctgaacgacaatgaccccactttccaaaacctgccctttgttgctgagatcgccgag ggccttcccgcgggctcctctgtcttccaggtcgtggccatcgacctggacgagggcccc aacgggcaggtgtcgtaccgcatgcaggtggggatgccccgcatggatttcctcatcaac agcactggcgggctggtcacctccacggccgtgctggacagggagaggatccccgagtac ttcctgagggtggtggccagcgacgccggcacgcccgccaagagctccaccagcaccctc actgtcaaagttctggatgtgaacgacgagaaccccaccttcttccctgctgtctacaac gtgtccctgcccgaggacgtggcccgggatttcaaagtggtccggctcaactgcacggat gccgacatcgggctgaacgccgagctcagctacttcatcacaggtgggaaccaggatggc aaattcagcgtcggcttcagggacggggtggtcaggacagtcgtgagtctggacagggag acggtggcatcctacacactgatcctggaggccattgacaatggccccagcgggaaccgg cgcaccgggactgccacggtgtacgtgactgtgctggatgtcaacgacaacagacccatc ttcctgcagagcagctatgaagtcagcgtccccgaggacatcccggctgccagcagcatc gtgcaggtgaaagccaccgatgcggacgaaggcattaacgggagagtgtggtacaggatt gtcaagggaaacgagcacaaccacttccgcatcaatcccagcacggggctggtgatgcga ggtgtgcggcacctggacagggagcagaactcctcccacgtgctggaggtggaggcctac aacacggagcaggggcccatgaggagctccgtgcgggtgatcgtgtacgtggaggacgtc aacgacgaggtgccggtgttcacccagcgccagtacaaccgcctggggctgcgggagacg gcgggaattgggacctcggtggcggtggtccgggccaccgaccgagacacagggaacggg ggtctggtgagctacaaaatcgtgtcgggcgcggaagggaagttcgagatcgacgagagc acgggcctcatcaccaccatagagtacctggactacgagaccaaaaccagctacctgatg aatgtctctgccacggaccaagcgccccccaacaaccagggcttctgcagtgtgtacgtc agcctgctgaacgagctggacgaggccgtgcagttctccaacagcagctacgaggccgtg atcatggagaacatccccctgggctccgaggtgctccgcgtccaggctcgctccatcgac aacctcaaccagatcacctacaagttcgaccccaacaccaacccccaagcgctctccctc ttcaaaatcaatgggatcacgggtgtgatcacggtgaaaggccaggtggaccgagagaaa ggggatttctacaccttgacagtggtggctgatgatggaggaccaaagattgactccaca gtgaaggtgaccatcacagtcctggacgagaacgacaacagcccccagtttgacatcacc tctgactcgtctgtcagcgtggccgaggacagcgccgtgggcaagagggtggccctggtg ctggcccgagatccagatgcaggcaggaatggccaggtgactttctcgctgacatctggg aatatcggccgggcttttgagatccgaaccaccaatggcacctacggcgaggtgttcgtg gcacggccactggaccgggagctgctggatcactacaccttacggatccaagcgtcggat ggcggcgttcccccccggaggaaggagcacgttctacgagtgaacatccttgatgtcaac gacaacccccctgtcatcgacagccccttcggctacaatgtgagcgtgagcgagaacgtt ggcggtggcacggcggtggcccaggtacgcgccaccgaccgggacatcggcctcaacagt gtcctctcctactacatcacccgtggcaacgaggacctgaccttccgcatggaccgtgtc accggcgagatcgccacccggccctccccgcccgaccgcgagcgccagagcttctacagc ctcgtggtcaccgtggaggacgagggcaacccctccctgtcggccaccaccacggtgtac gtcaccatcctggatgagaacgacaacgctcccgccttccggcagcagctgtacgaggtg accctcgacgagggtccctccacactcaacgccagcctggtcaccgtgcaggccctggat caggatgagggacccaatggcacggtggcctatgccatcaccgaaggcaacatcttgggt accttccacattgacaacgccacgggcgagatccgcacggtgaaggagctggactacgag atcagccacgggcgctacaccttgatcgtcaccgccaccgaccagtgccccatcgtctcg cgccggctgacgtcgaccgccacggtgctggtgaacctcaatgacatcaacgacaactgt cccaccttcccgcggccctacgaaggtcccttcgatgtcaccgaggggcagcccggccct cgtgtctggactttcctggcccatgacggggactcaggacccagtggacaggtggaatac agcatcatcgccggggaccccctcggggaatttgtcatctccccggtggaaggagagctg cgggtgcggaaggacgccgagctggaccgcgagaacatccccttctataacctcaccatc gccgcccaggaccgcggcgtgcctcccctcagctccaccatcctggtgggtgtccgtgtg ctggacatcaacgacaacgaccccgtgctcctgaacctccccatgaacctcaccctgagc gagaacgccgccgtctccagcttcgtcacccgcgtcctcgcccgggacgcagaccagggc cccaatgccctcctgaccttcgacataacagcagggaacacggagaatgccttctacatc aacagcactagtggcatcgtgtacgtgaaccgcccgctggacagggagcgggtggccgag tacaggctgacggtcacggtgaaggacaaccccgagaacattcgcaatgccaggcgggat tttgacctgctggtcatttccatagcggatgagaacgacaaccgccccctcttcacccag ggatcctaccaggctgaggtgatggagaactcgccccctggagctgtgaagatcaaaact cccctcaaccgtgaactagtggccacctacgaggtcaccatctctgtccatgacaacgcc agcgaagtcatcgaccgctcggtcagcgtgcccaacgccaagctgacagtcaacgtcttg gacgtcaatgacaacacaccccgcttccgccccttcggggtcacctacttcactgagcgg atcctggagggagccacgcagggaaccacgctcatctccatctcagcagtggacccagac aaaggtgccaatgggcagatcacctacgagctgctgaacctctctccggaaggttacgcc tgtctggaagaccattcggcagggaaggttgtggccaacaggacagtggactatgaggag gtgcagtggctgaacttcaccgtccgtgcctccgacaacggctctccccgcagatccgct gagatccccgtgtacctccagatcgtggacatcaatgacaacaaccctgttttcagtcat ccgtcctaccagaaagctgtcttcgaggacgtgccgttgggtacggtcatcctgagcgtc acggccaccgatgcagattccggacagtttgctctcatccagtacagcctgggtgatgga gagggcaagtttgggataaatcccaacacgggtgacatctacatcctgtcagccctggac cgggaaaagaaggatcactacacactgacagctgtggccagggacaaccctggggatgtc tccagtaaccgtcgggagaactctgtgcaggtgctgatcacagtgctggacatcaacgat gtcaggccccagttcagcaagagccagttcagcaccagcgtctacgagaatgagccggcg gggacgtcagtgatcaccatgagtgccaccgacctggacgaaggggacaacggcgtggtg acctacagcatcgagggtcctggagcagaggctttcaagatcaacaaggactctgggctt gtcacatcccggcggcgcctgcagtcctacgagaggttcaacctgactgtggtggccacg gacaaggggcatccccctctctgggggaccaccatgctccacatcgaggtcatcgacatc aatgacaaccgccccgtcttcgtccgcccgcccaacggcaccatcctgcacatcaaggag caggagatccccctgcgatccaacgtctatgaggtctatgccacggacaaagacgagggt ctcaacggagtggtgctctacaacctgctgaaaaccggggcagggaacaaggactgggag tatttcagcatcgactcggtcagcgggctgatccagacggccatgcggctggaccgggag aagcaggcagtgtacaacgtgagccagccaggggccagggcaggcctgggggctgtgggg ctggcatgggactggtgggatgcaagtgatgtggtggggatggcatcagctgagatatca cacctcaacaagaactgggtggttatcaagtgtcttaggagggttgcatcctggtgcaac agcacccaatttcctgttaaatccccgcaaaattctccagcatccagctgttctctctgt ccctgcctcagtggtgtctcccagcccgtgtggttttgcccaggacagctcttttgcctc tcttcccagctgatcatcgtggcctgcgaccagggccagccaccctacgagacgatgcag ccgctccaggtagcgctggatgacatcgatgacaatgagcccatcttcctcaggccacct aaggacagtccccagtaccaggcactctctgtccccgagcactcacggccaggcaccgtg gtggggaacgtcaccggtgcggtggatgcagatgagggctccaacgccatcgtctactac ttcatagcagctgggaaccaggagagcaacttccagctgagccgagaagggaagctgaag gtcttgcgagatctggaccgggagaaggagccataccactccatcatcgtcaaagcatcc agccagaggaactgggctcctccccggggccagcgggcagcaaggacccagttctgggac ctcagcgaggacctgaccctgcaggaggtgcggatcttcctggacgacatcaatgaccag tccccccagttcaccaagtcggagtacacggcgggggttgccaccgatgccaaggtgggg tcggagctgatcagggtgctcgcagtggacgccgacgtgggcaataacagcctggtcctg tacaacatcctgggcatccgctacatcaagcagcactccaatgactccgaggaggtggcc aacatcttcagcattggaacccttgatggcatcctgcgaacctttgacctcttcacggcc tataaccccggctactttgtggttgacattatggcctctgacctggtgggccacaatgac acggccattgtgggaatttacatcctgcgggatgaccagcgggtcaaaatcatcatcaat gagatccctgacaaggtcaggcagtttgaggaggagttcatcagcctgctctccaacatc acgggcgccatcgtcaacacggatgatgtgcagttccatgttgacaagaaaggccgggtg aactttgcccagacggagctgctgatccacgtggtgaacagggagaccaaccgcatcctg gacgtggagcgggttattcagatgatagacgagaacaaggagcagctgaggaatctcttc aggaactacaacgtgctggacgtgcagcctgccattactgcccgcgcaccggacgacctc tcggctctgcagatggcaatcattgtgctggccgtcctgctcttcctggctgccatgctc ttcatcctcatgaactggtactaccggacagtgcacaaaaggaaattgaaagccatcgtg gctggctccactgggaacagaggcttcatggacatcatggacatgccaaacaccaacaag tactcttttgatggggccaacccggtgtggctggaccccttctgcaggaacatggagctg gcggcgcaggcggagcacgaggacgacctgccggagaacctgagcgagatcaccgacctc tggaacagccctgcccgcacccacggcaccttcgggagagagccctcggccgccaagccc gaggatgaccgctacctgcgggcggccatccaggagtacgacaacattgccaagctgggg cagatcatgcgggagggacccatcaagctgatccagaaggagctggaggacgaggaggag gaacgcagccccagccagggcagcctgcgcttcagacacaagcagccggtggagctgaag ggtcccgatggcatccacgtcgtgcacggcagcacgggcacgctgctcgcctccgacctc aacagcctgcccgaggacgaccagaaggtgctgggtcgctcgctggagactctgaccgcc gactgcggggcctacagcgaccacaacgcccgcaccgagtcggccaagtccaccccactg cacaagatgcgggaggtgatcatggagagccctctggagatcaccgagttatga

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