Taeniopygia guttata (zebra finch): 100221799
Help
Entry
100221799 CDS
T01082
Symbol
CACNA1E
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X3
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04010
MAPK signaling pathway
tgu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100221799 (CACNA1E)
04020 Calcium signaling pathway
100221799 (CACNA1E)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tgu04040
]
100221799 (CACNA1E)
Ion channels [BR:
tgu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100221799 (CACNA1E)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100221799
NCBI-ProteinID:
XP_030135485
LinkDB
All DBs
Position
8:complement(29258890..29401933)
Genome browser
AA seq
2382 aa
AA seq
DB search
MQNTHSCNLLEPQSLAQALVSRAASFDALYDGRCRDGEAQAGALQLGLGQLVPVSPDLIK
RRRGGLIEQRDIIKAHEAHKMQSTPQARRKEWEMARFGEAVAGRLGSGDGGSDQNRSRQG
APAPAGGSPGAFKQTKAQRARTMALYNPIPVRQNCFTVNRSLFLFGEENIVRKYAKKLID
WPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIKIVALG
FVFHKGSYLRNGWNVMDFIVVLSGILATAGTHFNTHVDLRTLRAVRVLRPLKLVSGIPSL
QIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHRACYTNNSGELEELDPPHP
CGVQGCPPGYECREWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGATWN
WLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRAWI
DKAEEVMLAEENKNSGTSALDVLRRATIKRNRTDAMSGDEHCVDIASVGERRLAQRRRLN
PTLGNPSSQSGLKGARVDGASYLRHKERLLRISVRHMVKSQVFYWIVLSLVALNTACVAI
VHHNQPAWLTHFLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSSFNCFDCGVTVGSIFEV
VWAIFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSSMKSIISLLFLLFLFIV
VFALLGMQLFGGRFNFMDGTPSANFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVRS
GMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQKAKEV
SPMSAPNMPAIERDRRRRHHMSMWEPRSSHLRERRRRHHMSVWEQRTSQLRRHMQMSSQE
AINKDEPPLINPHASIFRRKRPGEGVTLEKCAEEQGKGEREGPEQPVPGANPGGGEDRTS
PRAKRDMWQQKSCHGNCEPGEQDGAGGSIEDRARMRQSQRRSRHRRARMEGKDTAGILGS
RSASQEMGLEEASTAEGAQDGDRRGDMAAAEALIPGEPEASGESIRTNGVPAGDADLLGT
AKKGSPPHAAPELSQGKTGTLTEQDCSSPDTSEQALLEPRRSVSRSEPDLSSITPNTEKA
TESTAIMIDVHDSAVVQISNKTDGEASPLKEAETKEDEEEMEKKKRKKEKSETGKAMVPH
SSMFIFSTTNPVRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSDRNKVLRYFD
YVFTGVFTFEMVIKMIDQGLILQDGSYFRDLWNILDFIVVVGALVAFALANALGTNKGRD
IKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQL
FKGKFFYCTDSSKDTQKDCIGNYVDHEKNKMEVKCREWKRHEFHYDNIIWALLTLFTVST
GEGWPQVLQHSVDVTEEDRGPSRSNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQG
DKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTFQYRVWHFVVSPSFEYTIMAMIAL
NTVVLMMKYYSAPYTYELALKYLNIAFTMVFSLECVLKIIAFGFLNYFRDTWNIFDFITV
IGSITEIILTDTKLVNTSSFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYV
CLLIAMLFFIYAIIGMQVFGNIKLDEESHINRHNNFRSFLGSLMLLFRSATGEAWQEIML
SCLEGKGCEPDTTATSGQNENERCGTDLAYVYFVSFIFFCSFLMLNLFVAVIMDNFEYLT
RDSSILGPHHLDEFVRIWAEYDRAACGRIHYTEMYEMLTLMSPPLGLGKRCPSKVAYKRL
VLMNMPVAEDMTVHFTSTLMALIRTALDIKIAKGGADWQQLDSELQKEILTIWPHLSQKM
LDLLVPMPKTSDLTVGKIYAAMMIMDYYKQSKAKKQRQQLEEQKNAPMFQRMEPSSLPQE
IISNAKALPYLQQDTLSGLSSRGGFSSLSPLSPQEIFQLACMDPAQEQFQEHQSLEPEVR
EFQRVQPSNRGSYLPVDTQDHAVSGRASSMPRLTVDPQVVTDTSSMRRSFSTIRDKRPNS
SWLDEFSMERSSDNTYKSRRRSYHSSLQLSARRLNADSGHRSEGHRSGRERGRSKERKHL
LSPDISRCNSEERSPQAQEESPERRRESRSPSEGRSQTPSRQGMGSLSESSIPSISDTST
PRRGRRQLPPVPPKPRPLLSYASMLRHAGDTSPPADESEGGSPLLSSSLDPSTAGPAESS
SSPVAGKQSRQSTPQRYISEPYLALHDDSHASDCGEEETLTFEAAVATSLGRSNTIGSAP
PLRHSWQMPNGHYRRRRRGAAQGVMCGASIDVLSDTEEDDKC
NT seq
7149 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacacccattcctgcaacctgctggagccccagagcctggcccaggccctggtg
tcccgcgccgcctccttcgacgcgctctacgatggccgctgccgcgacggcgaggcgcag
gccggcgccctgcagctggggctgggccagctggtgcccgtcagccccgacctgatcaag
cgccgccggggagggctcatcgagcagagggacatcatcaaggcacacgaggcacacaag
atgcagagcacgccccaggcacggaggaaggagtgggagatggctcgctttggggaggca
gtggccggcaggctgggctccggagatgggggctccgaccagaaccggagccggcaagga
gctcctgcccctgcgggaggcagcccgggagccttcaagcaaaccaaagcgcagagagcc
cggactatggctctgtacaaccccatccccgtccggcagaactgcttcaccgtcaacaga
tcgctcttcctcttcggggaagagaacatagtcaggaaatacgccaagaagctcatcgac
tggcctcccttcgagtacatgatcctggcgaccatcattgccaactgcatcgtgctggcc
ctggagcagcacctccccgaggatgacaagacgcccatgtcacggagattagagaagaca
gagccctacttcattgggattttctgcttcgaggctgggattaagatcgtagccctgggg
ttcgttttccacaagggctcgtacctgcgcaacggctggaacgtcatggacttcatcgtg
gtcctcagcggcatcctcgccacggccgggacacacttcaacacccacgtggacctgcgg
acgctgcgcgccgtgcgcgtgctcaggcccctgaagctcgtctcgggcattcccagcttg
cagattgtcctgaaatccatcatgaaggccatggtgcctctcctgcagatcggcctgctg
ctcttttttgctatcctcatgtttgccatcatcggcctggagttctacagcgggaagctg
caccgagcctgctacacaaacaattcaggtgaactggaggagctggaccctccccatccc
tgcggggtgcagggttgccccccgggctacgagtgccgggagtggatcggtcccaacgac
gggatcacgcagttcgacaacatcctctttgctgtgctgaccgtcttccagtgcatcacc
atggaagggtggaccacagtcctgtacaacaccaatgatgccttaggagccacctggaac
tggctgtacttcatccccctcatcatcattggatccttcttcgtcctcaaccttgtcctg
ggagtgctgtcaggggagtttgccaaagagagagagcgcgtggagaaccgccgagccttc
atgaagctgcggcgccagcagcagatcgagcgggagctcaacggctaccgggcgtggata
gacaaagcggaggaagtcatgctggccgaagagaacaaaaattcggggacctcagcctta
gacgtgctcaggcgagccaccatcaagcggaaccgcacggatgccatgtcgggtgacgag
cactgtgtggacatcgcctccgtgggcgagcggaggctggcgcagaggagacgtcttaat
ccaaccttgggtaacccctcaagtcaatctggcctcaaaggtgccagggtggacggtgcc
tcctacttgcggcacaaggagcggctcctgcgcatctccgtccgccacatggtcaaatcc
caggtcttctactggattgtcctgagcctggtggctctcaacactgcctgcgtggccatc
gtccatcacaaccagccagcctggctcacccacttcctctactatgcagagttcctgttt
cttgggctcttccttctggagatgtccttgaagatgtacgggatggggccacgcctttac
ttccattcttccttcaactgcttcgactgtggggtcacagtgggaagcatcttcgaagtg
gtttgggctatattcaggccaggaacctcttttgggatcagtgttctacgagctcttcgt
ctcctgcggatatttaaaataaccaagtactgggcatccctgaggaatttggtggtctcg
ctgatgagctccatgaaatctatcatcagtctgctcttcctcctcttcctctttattgta
gtctttgccctgctgggaatgcagctgtttggaggcaggtttaacttcatggatgggact
ccctcggccaactttgacaccttccctgcagccatcatgacggtgtttcagatcctgaca
ggcgaggactggaacgaggtgatgtacaacggcatccgctcccagggaggtgtgcgctca
gggatgtggtcctccatctacttcatcgtcctcaccttgtttgggaactatactctgctg
aatgtcttcttggccattgccgtggacaacctggccaatgctcaggagctcaccaaggac
gagcaggaggaagaggaggcctttaaccagaagcatgcccttcagaaagccaaagaagtc
agccccatgtctgccccaaacatgcctgctatcgaaagagacaggcggaggagacaccac
atgtcgatgtgggagccacgcagcagccacctgcgggagcgtcgccggcggcaccacatg
tcggtgtgggagcagcggacgagccagctgcgccggcacatgcagatgtccagccaggag
gccatcaacaaggacgagccgcccctcatcaatccccacgccagcatcttccgcaggaag
agacccggggagggtgtcaccctggagaaatgcgctgaggagcagggcaagggcgagcgc
gagggacccgagcagccagtcccaggggcgaaccccggcggtggggaggacaggacatcg
ccacgggccaagcgagacatgtggcagcagaagtcttgccacgggaactgtgagccagga
gaacaggacggggcaggaggcagcatcgaggacagggcgaggatgaggcagagccagcgg
cgcagccggcaccgcagagcccgcatggaggggaaggacacggctggcatcttggggagc
cgctcggccagccaggagatggggctggaggaggccagcaccgccgagggggcacaggac
ggggaccggcgtggggacatggctgcagcagaagcgctgattccaggggagccagaggcg
agcggggagtccatcaggacaaacggggtccctgctggcgatgccgatctgcttgggacc
gccaagaaggggagccccccacacgccgcacccgagctctcccagggcaagacgggcacc
ctgacggagcaggactgcagcagcccggacacgagcgagcaggcgctgctggagcccagg
cgcagcgtgagccgcagcgagcccgacctctcctccatcacccccaacactgagaaggcc
accgagagcactgccatcatgatcgatgtccacgactccgctgtggtacagattagcaac
aagacagacggtgaagccagccccttaaaggaggccgagaccaaagaggatgaggaagaa
atggagaagaagaagcggaagaaggaaaagagcgagacgggcaaagccatggtgccgcac
agctccatgttcatcttcagcaccaccaacccggtgaggagggcctgccactacatcgtg
aacctgcgctacttcgagatgtgcatcctcctggtgatcgctgccagcagcatcgccctc
gccgccgaggatcccgtcctcaccaactccgaccgcaacaaagtgctgaggtatttcgac
tacgtcttcactggtgtcttcaccttcgagatggtgatcaagatgattgatcagggcttg
atcctgcaggatggctcctacttccgagacctgtggaacatcctggatttcatcgtggtg
gtgggagcgctggtggcttttgccttggcgaatgctttggggaccaacaaaggccgggat
atcaagactatcaagtctctccgtgtgctgcgggtcttgaggcccctgaaaaccatcaag
agactgcccaagctaaaggctgtttttgactgtgtcgtgacatctctcaagaacgtcttc
aacatcctcattgtctacaagctcttcatgttcatcttcgccgtcatcgccgtgcagctc
ttcaaggggaagttcttctactgcaccgacagctccaaggacacgcagaaggactgcata
gggaactacgtggaccacgagaagaacaagatggaggtgaaatgtcgggagtggaagcgg
cacgagtttcactatgacaatatcatctgggctctgctcaccctgttcaccgtgtccact
ggcgaagggtggccccaggtgctgcagcactcggtggatgtgacggaggaggaccgcggg
cccagccgcagcaaccgcatggagatgtccattttttatgtcgtctacttcgtggtcttc
cctttcttcttcgtcaacattttcgtggctctcatcatcatcacgttccaagagcaagga
gacaaaatgatggaggagtgcagcctggagaagaacgagagggcctgcattgactttgcc
atcagcgccaagcccctgacgcggtacatgccccagaacagacacaccttccagtaccgc
gtgtggcacttcgtggtgtccccgtccttcgagtacaccatcatggccatgattgcgctc
aacaccgtggtgctcatgatgaagtactattctgctccatacacctatgagctggccctc
aagtacctgaacattgccttcaccatggtgttctccttggagtgcgtcctcaagatcatc
gcttttggcttcctgaattatttccgggacacctggaacatctttgacttcatcacggtc
attggcagcattacggagatcatcctgacggacaccaagctggtgaacaccagcagcttc
aacatgagtttcctgaagcttttccgggctgctcggctcatcaagctgctccgccagggt
tacaccatccgcatcctgctctggacctttgtgcagtccttcaaggcactcccctatgtc
tgcctgctgattgccatgcttttcttcatctatgccatcattgggatgcaggtttttggc
aatatcaaactagatgaggaaagccacattaaccggcacaacaacttccgcagcttcctg
ggctccctcatgctcctcttcaggagtgccaccggagaggcgtggcaggagatcatgctg
tcctgcctggagggcaaaggctgcgagccggacacgacggccacgtccgggcagaacgag
aacgagcgctgcggcactgacctggcctatgtttactttgtgtccttcatcttcttctgc
tccttcctgatgctcaatctgtttgtggccgtcatcatggacaactttgaatacctgaca
cgggattcctccatcctgggccctcaccatctggatgagtttgtccggatctgggcagag
tatgaccgagcagcgtgtggccgaatccattacactgagatgtatgaaatgctgactctt
atgtcaccaccgctaggcctcggcaagagatgtccttccaaagtggcctataagagactg
gtgctgatgaacatgcccgtggccgaggacatgacagtccacttcacctccaccctcatg
gccctgatccgcacggccttggacatcaaaattgccaaaggtggtgcagattggcagcag
ttggactccgagcttcaaaaggagatcctgaccatttggcctcacctgtcccagaagatg
cttgacttgttggtacccatgccaaaaacctctgacctgactgttgggaaaatatatgca
gccatgatgatcatggattactacaagcagagcaaggcgaagaagcagcggcagcagctg
gaggagcagaaaaatgccccaatgttccagcgcatggagccgtcctctctgccccaggaa
atcatctccaacgccaaggctctgccgtacctccagcaggacaccctctcgggcctgagc
agccgaggtgggttctcctcgctaagcccgctctcgccacaggagatcttccagctggcg
tgcatggatccggcccaggagcagttccaggagcaccagtctctggagccagaggttagg
gagtttcaaagagtgcagccctctaaccgtggcagctaccttcccgtggacactcaggac
cacgctgtctctgggagggcctcctccatgcctcgtctcactgtggatccccaggtggtg
acagacaccagctccatgcggagatcgttctccaccatccgggacaagcggcccaacagc
tcctggctggacgagttctccatggagcgcagcagcgacaacacctacaagtcccgccgg
cgcagctaccactcctcgctccagctgtccgcccggcgcctcaacgctgactcgggccat
cggtccgaggggcaccgctcgggcagggagcgaggccggtccaaagagcgcaagcacctg
ctgtcccctgacatctcccgctgcaactccgaggagaggagtccccaggcacaggaggag
tcgccagagcgtcggcgcgagtcccggtcacccagcgagggcaggtcacagacacccagc
aggcagggcatgggctccctgagcgaaagctccatcccctccatctcggacaccagcacg
ccccggcgaggccgccgccagctgccgcctgtgccccccaagccgcgtcccctcctgtcc
tacgcctccatgctgcgacacgctggggacacctctcctcccgccgacgagagcgagggt
ggctcaccactgctctcctccagcctggatcccagcacggccggcccggccgagtcttcc
agctccccggtggcggggaagcagagccggcagtccacgccgcagcgctacatctcggag
ccctacctggcgctgcacgacgactcgcacgcctcagactgcggtgaggaggagacgctc
accttcgaggcggccgtggccaccagcctgggccgctccaacaccatcggctcggcgcca
ccgctgcggcacagctggcagatgcccaacgggcactaccggcggcggcggcgaggagcg
gcgcaaggtgtgatgtgcggggccagcatcgacgtgctcagcgacaccgaggaagatgac
aagtgctag
DBGET
integrated database retrieval system
