Taeniopygia guttata (zebra finch): 100231214
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Entry
100231214 CDS
T01082
Symbol
MGRN1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X2
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu04120
Ubiquitin mediated proteolysis
tgu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100231214 (MGRN1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100231214 (MGRN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tgu04121
]
100231214 (MGRN1)
Enzymes [BR:
tgu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100231214 (MGRN1)
Ubiquitin system [BR:
tgu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100231214 (MGRN1)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100231214
NCBI-ProteinID:
XP_012432338
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Position
14:complement(13842861..13893224)
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AA seq
560 aa
AA seq
DB search
MGSLLSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYITPAPHEPVKTLRSLVNIRKDSLRLVRYKDDVDSPTEENGKQKVLYSL
EFTFDADARVAITIYCQATEEFVGGMAVYSTKNPSLQSETVHYKRGVSQQFSLPSFKIDF
SEWKDDELNFDLDHGVFPVVIRAVVDEGDVVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQ
KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC
NSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSVDHDEHSSSDN
IPPGYEPISLLEALNGLRSASPSLPSAPLYDEITYSGVVDGVPPASRPLVAMDRALEGGH
QKGKLSKSPDSTLRSPSSPIHEEDEEKLSEDSDSQAVLSGAELVLRETSSPESVAGEEME
EASSVQQGSRPPSVEDVLQDGGCGESRSLTQSESDPPVDVFLPGSSDFTKTLPVRGTGSP
TQPLLFEQTRLHLEDEQSLP
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggctccctgctcagccggcgcatcgcgggagtggaggacatcgacatccaggccaac
tcggcctaccgctacccgcccaagtccggaaactactttgcaagtcacttctttatggga
ggtgagaagtttgacacccctcaccctgagggttacctttttggtgagaacatggactta
aacttccttggaaatagaccagttcagtttccctatataactccagccccacatgagcca
gtgaagacactgaggagtttggtgaacatccgcaaggactctctccgacttgtgaggtat
aaagatgatgttgacagccctactgaggagaatgggaagcagaaggtcttgtacagcctg
gagttcacctttgatgcagatgcccgtgttgccatcacaatctactgccaggctacagag
gagtttgttggtggcatggccgtatacagcacaaagaatccctctctgcagtccgagaca
gttcattacaagagaggggtaagccagcaattctccctgccttccttcaagattgatttc
tcagagtggaaggacgatgagctgaactttgacttggaccatggtgtgttccctgtggtc
atccgagcagtggtggatgaaggggatgtggtggttgaggtcactggtcatgcccatgtt
cttctggctgcatttgaaaagcacgttgatggcagtttttccgtgaaaccactaaaacag
aagcagattgttgaccgggtgagctacctgcttcaggagatctacggcatcgagaacaaa
aacaaccaggagaccaagccttcagacgacgagaacagcgacaacagcaacgagtgcgtg
gtttgcctgtcggacctgcgggacaccctgatcctgccctgccgccacctctgcctctgc
aactcctgcgccgacaccctgcgctaccaggccaacaactgccccatctgcaggctgccc
ttccgtgccctgctgcagatccgggcggtgaggaagaagccgggggctctgtcgccggtg
tcgttcagccctgtcctggcacagagtgtggaccacgatgagcactctagctctgacaac
atccccccgggctatgagcccatctccctgctggaagcgctgaacggcctccgctccgcg
tccccctcgctgccctccgcccctctctacgacgagatcacctactcgggggtggtggac
ggggttcctcccgccagccgcccgctcgtggccatggacagagccctggagggtggccac
caaaagggcaagctcagcaagtctccagacagcacactacggtctccctcatccccgatc
catgaggaggatgaggagaagctctccgaggactctgactcgcaggcggtgctgagcggg
gctgagctggtcctgagggagaccagctctccagagagcgtggcaggggaagagatggag
gaggcctcatcggtgcagcagggtagccgcccaccctcggtcgaggacgtgctgcaggac
ggtggctgtggtgagagccggagcctgacgcagtccgagagtgaccccccggtcgacgtg
ttcctgccaggctcgtccgacttcaccaagacgctccccgtccgcggcaccggcagcccc
acgcagccccttctcttcgagcagacccgtctgcacctggaggacgagcagagccttccg
tga
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