Thermococcus guaymasensis: X802_01910
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Entry
X802_01910 CDS
T04184
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tgy
Thermococcus guaymasensis
Pathway
tgy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tgy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X802_01910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tgy03019
]
X802_01910
03009 Ribosome biogenesis [BR:
tgy03009
]
X802_01910
Enzymes [BR:
tgy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
X802_01910
Messenger RNA biogenesis [BR:
tgy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
X802_01910
Ribosome biogenesis [BR:
tgy03009
]
Prokaryotic type
rRNA helicases
X802_01910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrA_inter
CMS1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AJC71078
UniProt:
A0A0X1KIJ6
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All DBs
Position
complement(345136..346314)
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AA seq
392 aa
AA seq
DB search
MSFERLGLSESSLEAVRRKGFETPTDIQREVIPRLLEGTVDIIGQSQTGTGKTAAFALPI
IEAIDSNEKTVQAIILTPTRELALQVADEIKSLRGKKRIYVYAIYGGQPIGPQIRALERG
VHVVVGTPGRVLDHLNRGTLDLSAVKFFVLDEADRMLDMGFIDDIEEIMKRAPEDKRILM
FSATMPMGILLLAKKYMKNPDVVLVSRDEIVPEMVDQEYIEVLPARKYEKLKEVLDEGFY
GIIFCHTKRETRELSERLRRDGFKADALNGDMSQAARERTFGRFKERKINVLVATDVAAR
GLDVGEITHVVNYSLPMNPEQYIHRIGRTGRMGKKGKAITFLEPGEIGRFRGIARKAKVE
VKRSHLSEKIPKHFRNENLEREYRQRWGRRRF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgaaagattgggactgtcagaatcaagtttagaggcagttagaaggaagggt
tttgagaccccaacggacatccagagggaggtaatccctcggcttttggaggggaccgtt
gatataatcggtcagtctcagacggggactggcaaaacagccgcttttgccctcccgata
atagaggcgatagactcaaatgaaaaaacagtacaggctataatactcacgcccacaagg
gagctcgcccttcaagtggccgatgaaatcaagagcctccgcggaaagaagaggatatac
gtgtatgcgatttatgggggccaacccataggacctcagataagggcacttgagaggggc
gttcatgtagttgtgggaacccctggaagggttctcgatcacctcaacagaggtacccta
gacctcagtgctgtgaaattctttgtgctcgacgaggcggacaggatgctcgatatgggc
ttcatagatgacatcgaggaaataatgaagagggcacccgaagacaagaggatactcatg
ttttcggctacgatgccaatggggattctattgctggcaaagaagtacatgaaaaaccca
gatgttgtccttgttagtagggatgagatagtcccagagatggtcgatcaagagtacata
gaagtcctcccagcgagaaagtatgaaaagctgaaggaggtcctggacgaggggttctac
ggcataatcttctgccacaccaagagggaaacccgagaactcagcgaaaggctgaggagg
gatggcttcaaggcagacgccctcaacggggacatgagccaggccgccagggagagaacc
ttcggtcgctttaaggagcggaagatcaacgtactcgttgccacagatgtagcggcacgg
ggacttgacgtcggagagataactcatgttgtcaattattcacttccaatgaatcctgag
cagtacatccacaggattggaagaaccggcaggatgggaaagaaaggaaaggctatcact
tttctcgaacccggtgagattggcaggttcaggggcatagcaaggaaagccaaggtcgag
gtgaagagatctcacctgagcgagaaaattccaaagcacttccgcaatgagaatttagag
agagaatacaggcagagatggggaagaaggaggttctga
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