Thalassotalea sp. LPB0316: LP316_09835
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Entry
LP316_09835 CDS
T08426
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
thab
Thalassotalea sp. LPB0316
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thab03032
]
LP316_09835 (topA)
03400 DNA repair and recombination proteins [BR:
thab03400
]
LP316_09835 (topA)
Enzymes [BR:
thab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LP316_09835 (topA)
DNA replication proteins [BR:
thab03032
]
Prokaryotic type
DNA Topoisomerases
LP316_09835 (topA)
DNA repair and recombination proteins [BR:
thab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LP316_09835 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
zf-TFIIB
Toprim_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QOL24644
UniProt:
A0A7L9S2S5
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All DBs
Position
2217050..2219722
Genome browser
AA seq
890 aa
AA seq
DB search
MAKSLVIVESPAKAKTINKYLGKNFVVKSSVGHVRDLPTGSSGKKVAAKSPAEVRKMSPE
AKAKYKAKRDKQALFNRMGINPEKDWQADYQILPGKEKVVTELKKLAQNADTIYLATDLD
REGEAIAWHLKEIIGADDDKYKRVVFNEITQNAIEQAFSEPGELSMPGVNAQQARRFLDR
VVGFMVSPLLWKKLARGLSAGRVQSVAVKLVVEKEREIKAFIPEEFWDIHAQTLTSDKTA
LKLAVTHESGKAFKPTNEAQTMSAVKALENASYQVSKREDKPSKSSPSAPFITSTLQQAA
STRLGYGVKRTMSLAQRLYEAGHITYMRTDSTNLSKDAVAMCRTYISENFGDDYLPEKAK
VYGAKSNAQEAHEAIRPSNVKLEAALLTDMDADCKRLYELIWRQFVACQMTAARYDVSTL
TVSAGDFDLKAKGRVMKFDGWTRVHPQLSKSDKDTHLPDLQVGDSLSLVELEPAQHFTKP
PARYGEASLVKELEKRSIGRPSTYASIISTIQDRGYVRLENKRFYAEKMGEIVTDSLSAS
FENLMSYDFTANMESELDAIAGGNSDWKAVLNEFYKNFTGLLEKADKPVEEGGMPSNEVV
LTDIDCPTCGRKMGIRTASTGVFLGCSGYALPPKERCTTTMNLTPGEEAVSVLAEDQETE
ALRAMHRCPKCSTAMDSYLIDEKRKLHVCGNNPQCDGVELESGEFKIKGYDGPIIECDKC
SSDMELKSGRFGKYFGCTNSECKNTRKLLANGEAAPPKEDPVQLPELPCEKSEAHFVLRD
GAAGIFLAASTFPKSRETRAPKVAELARFRDRISPKFYYLADAPAKDPDGNEAIVRYSRK
TKEQYVMTEVDGKATGWTAKYIDGKWVEEAKAKAKPKAKAKAKPKAKAKK
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcactggttatcgtcgagtcaccagcaaaagctaaaacgatcaacaaatac
ttaggcaaaaactttgttgttaagtcgagtgttggtcatgtgcgtgatcttccgacggga
agttcaggcaaaaaagttgcagccaaatctccagcagaagtgagaaaaatgtcacctgaa
gcgaaggcaaagtacaaagcaaagcgtgacaaacaagccttatttaaccgcatgggtatt
aaccctgaaaaagattggcaagcggattaccaaatactgccaggtaaagagaaagttgtt
actgaattaaaaaaactggcgcaaaacgctgatactatttatctcgcaaccgatttggat
cgcgagggagaagcgatagcatggcatttgaaagaaattattggtgccgacgacgataag
tacaagcgtgttgtttttaacgaaattacgcaaaacgcgattgagcaagcattctctgaa
ccgggagagttaagcatgccgggcgtaaatgcacaacaagcgcgccgctttttagatcgc
gttgttggctttatggtaagcccgctgctttggaaaaagctcgctcgcggtttatcggct
ggccgtgttcagtcagttgctgtaaaactcgttgttgaaaaagagcgtgagataaaagcc
tttatcccagaagagttttgggacattcacgcgcaaaccctaacgagcgacaaaacagcg
ttaaaattagcggttactcacgaatcgggcaaagcgtttaagccaaccaatgaagcacaa
acgatgagtgcggttaaagcgcttgagaatgcctcataccaagtcagtaagcgcgaagat
aaaccctcaaaaagttcgccttcagcaccatttattacctcgactttacagcaagcggca
agcacgcgattggggtatggtgttaagcgtactatgagcttagctcagcgcttatatgaa
gctggccacattacctatatgcgtaccgactcaaccaacttgagtaaagacgcagtagct
atgtgtcgcacttatattagtgaaaactttggtgatgattatttaccagagaaggcgaaa
gtatacggtgcaaaatcaaatgcacaagaggctcacgaagctattcgtccgtccaatgtg
aaattagaggctgcgctattaacagatatggacgctgactgtaagcgtttatacgagctt
atttggcgccaatttgtcgcttgtcagatgacggcagcgcgctacgatgtttcaacgcta
acggtatcagctggcgactttgatcttaaagccaaaggccgtgtgatgaagtttgacggt
tggacgcgtgttcacccgcaattatcaaaatcagataaagacacgcatttacccgattta
caagttggcgatagtttgtcattggttgaattagagccggcccaacacttcaccaaacca
cctgcgcgttacggtgaagcttcacttgttaaagagttagaaaaacgctcgattggtcgc
ccatcaacctacgcatcaattatttcaacgattcaagacagaggttatgttcgcctagag
aacaaacgtttttacgctgaaaaaatgggtgaaatcgtaaccgatagcttatcggcaagc
tttgaaaacttaatgagctacgactttaccgccaatatggaaagcgagcttgatgcaatc
gccggtggtaatagcgactggaaagcagtattaaatgagttttacaaaaacttcactgga
ttattagaaaaagcggataaaccggttgaagaaggcggtatgccgagtaatgaagtggta
ctcaccgatattgactgcccaacctgtggcagaaaaatgggtattcgcaccgcatcaact
ggcgtattcttaggttgctctggctatgcgctgccaccaaaggagcgctgtactactacg
atgaacctaacgccaggtgaagaagcggtaagtgtattagcagaagatcaagaaactgaa
gccttacgtgcgatgcatcgttgccctaagtgttcaacagcgatggatagctatctgatt
gatgaaaaacgcaagttacacgtatgtggtaataacccacaatgtgacggcgtagagtta
gagtcgggtgagtttaagatcaaaggttatgacgggccaattatcgagtgtgataagtgt
agttcagacatggaacttaaatcgggtcgcttcggtaaatactttggttgtactaacagt
gaatgtaaaaatactcgtaaactattagccaatggtgaagctgcgccaccaaaagaagat
ccggtgcaactaccagaattgccatgtgaaaaatcagaagcgcactttgttttgcgcgat
ggtgcagcaggcatattcttagcggcgagcacattccctaaatctcgtgaaacccgtgcg
cccaaagtggctgagctggctcgctttagggatcgcatttcacctaagttctattattta
gccgatgcaccagccaaagatcctgatggcaatgaagctattgttcgctatagccgtaaa
accaaagagcagtacgtaatgacagaggttgacggtaaggccactggatggacggccaaa
tatattgacggcaaatgggttgaagaggccaaagcaaaagctaaacctaaggctaaggcg
aaagccaagccaaaagccaaagcgaaaaaataa
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