Thalassospira sp. A40-3: IT893_12720
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Entry
IT893_12720 CDS
T08364
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
thai
Thalassospira sp. A40-3
Brite
KEGG Orthology (KO) [BR:
thai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thai03009
]
IT893_12720
Enzymes [BR:
thai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
IT893_12720
Ribosome biogenesis [BR:
thai03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
IT893_12720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
Ubie_methyltran
Methyltransf_25
Methyltransf_31
FtsJ
PCMT
NSUN5_fdxn-like
GCD14
Motif
Other DBs
NCBI-ProteinID:
QPO10636
LinkDB
All DBs
Position
complement(2754795..2756132)
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AA seq
445 aa
AA seq
DB search
MKPGARIAAVIELYDGWTHNRDDADRVVSGYFGSRRYIGGGDRREISERFYNLIRHQARL
GWWLAECDYQFQDGRARMIADLVLHDGLTTSEIEDRFCGEQFCPDILRPNEKHLINKLSG
TTLDHDAQPGAVKAELPKWLYTELMKLHHENLAAEMAAYNQPAKLDLRVNRLRGSVEDAI
KSLKADGIKDIERTPYAPNGLRLPLGLNMLVTAAYKDGLIEIQDEASQICVHLVDAKPGM
TILDMCAGGGGKTLGLAADMRGKGRILACDTHGGRLDNARKRARRAGAGDCIQQRIIADE
RDSWLRNKSGFFDRVLLDVPCSGLGTLRRNPALRWRIGQRDLRGLMAEQSKILKAGAAKV
TKGGRLIYATCSIMPEENERLIETFMRDRKDFKPVPVNEIWPDAPKSVPVPGGKDKPWLR
LSPNVHGTDGFFVAVFERTAKGKVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacccggtgcccgcatagcagccgttatcgaactttacgatggctggacccataac
cgagatgacgccgaccgcgttgtgtcaggctatttcggatcacgccggtatatcggcggc
ggggatcgtcgtgaaatcagcgaacgtttctataacctgatccgtcatcaggctcgtctg
ggttggtggctggcggaatgtgattatcagttccaggacggtcgtgcgcgcatgatcgcc
gatctggtgttgcatgacggtttgaccaccagcgagatcgaagaccgtttctgtggtgaa
caattctgccccgacattttgcgtcccaatgaaaagcatctgatcaacaagctttcgggc
acaacacttgatcatgatgcgcagcccggtgcggtaaaggccgaattgccgaaatggctt
tataccgaactgatgaagctgcatcacgaaaaccttgccgccgaaatggcggcgtataac
cagccggccaaacttgatctgcgcgtgaaccgcctgcgcggtagtgttgaagatgcgatc
aagtcgctgaaggctgatggcatcaaggatatcgaacgcacgccctatgcccccaatggc
cttcgtttgccgcttggtttgaacatgctggttacggcggcctataaagacggcctgatc
gaaatccaggacgaagcatcgcagatttgcgtgcatctggtcgatgccaagccgggcatg
acgattttggatatgtgtgcgggcggtggcggcaagacgcttggccttgcggcggacatg
cgcggcaagggccgtattcttgcctgtgacacccatggcggtcgtctcgacaatgcgcgc
aaacgtgcacgccgtgccggggcaggcgattgcatccagcaacgcatcatcgccgatgaa
cgtgacagctggcttcgtaacaagtcgggcttttttgaccgggtgttgcttgatgtgccg
tgctcgggccttgggacgcttcgtcgtaacccggcactgcgctggcggattgggcagcgt
gacttgcgcggcctgatggcggaacaaagcaaaatccttaaggccggtgccgccaaggtg
accaagggcgggcgcctgatttatgcgacctgttcgatcatgcccgaggaaaacgaacgt
ctgatcgaaaccttcatgcgtgatcgcaaggatttcaaaccggtgccggtcaatgaaatc
tggccggatgcgccaaaatcagtgcctgtaccgggcggtaaggacaagccgtggctgcgt
ttgtcgccgaatgtgcatggaacggatggtttctttgttgcggtgttcgagcgcactgca
aaaggcaaggtaaagtaa
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