Candidatus Endolissoclinum faulkneri L2: A1OE_1020
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Entry
A1OE_1020 CDS
T02365
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
thal
Candidatus Endolissoclinum faulkneri L2
Brite
KEGG Orthology (KO) [BR:
thal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thal03021
]
A1OE_1020 (rpoH)
Transcription machinery [BR:
thal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A1OE_1020 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
HTH_11
LysM
Motif
Other DBs
NCBI-ProteinID:
AFX99199
UniProt:
K7YRM0
LinkDB
All DBs
Position
940342..941229
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AA seq
295 aa
AA seq
DB search
MISNGNALPTISTEGNLSRYLQEIRNFPMLEPEEEYILAKNWREQGDTDSAHKLVTSHLR
LVAKIAMGYRGYGLPVAELISEGNVGMMQAVKRFDPERGFRLATYAMWWIRASIQEYILH
SWSLVKMGTTAAQKKLFFNLRKLKGQMQAIEDRDLPPEKVIAIAKRLDVTEADVVSMNRR
LTSPDHSLNAPLRIDGEGEWLEWLVDDEQISQETRLAEDEDLHKRLLLLNKAMDSLKDRE
RHILTERRLRDNPTTLEDLSQEYGISRERVRQIEVRAFEKLQKLIRNAAMDQNIP
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatatcaaatggcaacgcactacctacaattagtacagaaggtaatctatcacgatac
ctacaagagatacgtaatttcccaatgctggagcctgaggaagagtacattttagctaaa
aactggagagagcaaggagatacagattcagctcacaagctagtaactagtcaccttcgt
cttgttgccaaaatcgcgatgggttaccgtggctacggactgcccgttgctgaattgatt
tcagaaggtaatgttggcatgatgcaagcggtaaaacgttttgatccagagcgtggattc
cgtttagctacttatgcaatgtggtggatcagagcatctattcaggaatacattcttcat
tcttggtcgcttgttaaaatgggcaccacagcagctcaaaaaaagcttttcttcaacttg
cgcaagcttaaagggcaaatgcaagctattgaagaccgtgaccttccgccagaaaaggtt
atagcaatagccaagcgtctcgatgttacagaagcagatgtagtatctatgaatcgtcgc
ctaacgagtccagatcattcattaaatgctccactaagaattgatggagaaggcgaatgg
ttagaatggcttgttgatgacgagcagatcagccaggaaactcgcttagctgaggacgaa
gatcttcataaacgcctattgctcctcaacaaagcaatggatagtttaaaagatcgcgag
cgccatatattgacagaacgtcgtctaagagacaatcctactacactagaggatctaagt
caagaatacgggattagccgcgagcgagtacgtcaaatagaagtaagagcctttgaaaaa
ttacaaaaactgattaggaacgcagcaatggatcagaacattccctaa
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