Thermobifida halotolerans: NI17_019810
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Entry
NI17_019810 CDS
T08032
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
thao
Thermobifida halotolerans
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thao03021
]
NI17_019810 (sigM)
Transcription machinery [BR:
thao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NI17_019810 (sigM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_17
DUF2740
DUF4837
Motif
Other DBs
NCBI-ProteinID:
UOE18985
UniProt:
A0AA97M3H2
LinkDB
All DBs
Position
4449100..4449729
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AA seq
209 aa
AA seq
DB search
MNTVTDAVQELPDKELLFRHNQGDEHAFNELVKRHRARLWAVAIRVLGDQEEASDALQDA
FLSAFRGAHRFRGEAMVSTWLHRIVVNACHDRLRRRMVRPAVPTDDTALDVLSNERSGPT
PDPTGRSDTTLDVHAALEYLPTEQRLALVLVDMLGYRVDEAAKILDVAPGTVKSRCARGR
ARLLPYLSHLRNPGGSPDVPSPKGGGRRS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
gtgaacacggtgaccgacgcggttcaggagctccccgacaaagaactgctgttcagacac
aaccagggtgacgaacacgcattcaacgaactggtgaaacggcatcgcgcgcggctgtgg
gcggtggcgatccgcgtactgggcgaccaggaggaggcgtccgacgcgctccaggacgct
ttcctgtccgctttccgcggcgcccaccggttccgcggcgaggcgatggtcagcacatgg
ctgcaccggatcgtcgtcaacgcctgccacgaccgcctacgacgcaggatggtccgtccc
gcggtccccaccgatgacaccgctctcgacgtcctctccaacgagcgttccgggccgaca
cccgaccccaccggccgaagcgacaccactctcgacgtccacgccgcgctggaatacctc
cccaccgagcagcgactcgccctcgtcctcgtggacatgctcggctaccgggtggacgag
gccgccaagatcctggacgtcgcaccgggcaccgtgaagagcaggtgtgcccggggtcgc
gcgcgacttctcccctatctttctcatctcaggaaccctggaggctccccagacgtccca
tctccgaaaggaggtggcaggagatcgtga
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