Pukyongiella litopenaei: C6Y53_09115
Help
Entry
C6Y53_09115 CDS
T05357
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
thas
Pukyongiella litopenaei
Pathway
thas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6Y53_09115 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thas03021
]
C6Y53_09115 (rho)
03019 Messenger RNA biogenesis [BR:
thas03019
]
C6Y53_09115 (rho)
Transcription machinery [BR:
thas03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C6Y53_09115 (rho)
Messenger RNA biogenesis [BR:
thas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C6Y53_09115 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
OB_RNB
NACHT
AAA_25
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AVO39721
UniProt:
A0A2S0MVH6
LinkDB
All DBs
Position
1836530..1837801
Genome browser
AA seq
423 aa
AA seq
DB search
MTQESLTLASLKAKSPKDLLAVAEELEIENASTMRKGEMMFQILRERADDGWEISGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYVSPDMIRQHSLRTGDTIEGVIKAPDDSERYFALTD
VTKINFEEPEKARHKIAFDNLTPLYPDERLKMEIEDPTIKDKSARVIDLVAPIGKGQRSL
IVAPPRTGKTVILQNIAHSIERNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEP
ASRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKIADKRVF
PAIDILKSGTRKEDLLVDKGDLAKTFVLRRILNPMGTTDAIEFLLSKLKQTKSNGDFFDS
MNT
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagaatccctcaccctcgcttcgctcaaggccaaaagccccaaggacctgctc
gcggtagcagaagaactggagatcgagaacgcctcgaccatgcgcaagggcgagatgatg
ttccagatcctgcgtgaacgcgcggatgatggctgggaaatctccggcgatggcgtgctc
gaggtcctgcaggacgggttcgggttcctgcggtcacccgaggcgaactatctgcccggc
ccggacgatatctatgtgtcacccgacatgatccgccagcattcgctgcggaccggcgac
acgatcgaaggtgtgatcaaggcgcccgatgacagcgaacgctatttcgcgctgaccgat
gttaccaagatcaattttgaggaaccggaaaaggcgcgtcacaagatcgcctttgacaac
ctgacgccgctctatcccgatgagcggctgaagatggagatcgaggatcccacgatcaag
gacaagtccgcgcgggtgatcgacctggtggcgccgatcggcaagggccagcggtctctg
atcgtggcgccgccgcgcaccggcaagacggtgattctgcagaacatcgcccattcgatc
gaacgcaatcacccggaatgctacctgatcgtcctgctgatcgacgaacggcccgaggaa
gtcaccgacatgcagaggtcggtcaagggcgaagtggtttcctcgaccttcgacgaaccg
gccagccgccacgtcgccgtgtcggaaatggtcatcgagaaagccaagcgtctggttgaa
cacaaacgagatgttgtgatccttctggattcgatcacaagacttggtagggcattcaac
accgtggtcccgtcatcaggcaaggttctgaccggtggtgtcgatgccaacgcattgcaa
cggccgaaaaggttctttggtgccgcgcgcaatatcgaggaaggcgggtcgctgaccatc
atcgccaccgcgctgatcgataccggcagccgcatggacgaagtgattttcgaggaattc
aagggaaccggcaactcggagatcgtactggaccgcaagatcgcggacaagcgcgtgttc
ccggccatcgacatcctcaaatccggcacccggaaggaagaccttctggtcgataagggc
gacctggccaagaccttcgttctgcgccggattctcaatccgatggggaccacggacgcg
atcgagttcctgttgtccaagctcaagcagaccaagtccaacggcgatttcttcgattcg
atgaacacctga
DBGET
integrated database retrieval system
