KEGG   Thiohalocapsa sp. PB-PSB1: N838_17010
Entry
N838_17010        CDS       T07019                                 
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
thip  Thiohalocapsa sp. PB-PSB1
Pathway
thip03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:thip00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N838_17010 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thip03019]
    N838_17010 (pcnB)
Enzymes [BR:thip01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     N838_17010 (pcnB)
Messenger RNA biogenesis [BR:thip03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     N838_17010 (pcnB)
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: QQO57931
LinkDB
Position
complement(3995862..3997193)
AA seq 443 aa
MPTPLIVPRPEHTISRANISQNALKVLYRLSQAGHQAFLVGGGVRDLLLGHEPKDFDIAT
DATPEQVRSVFRNCRLIGRRFRLAHVFFGSEIIEVATFRGAPAAQDTDPNSDAGDRLVEN
GIILRDNVYGTIAEDALRRDFTINALYYNIADFSLVDYAGGLDDIRDGRLRLIGGDAEAR
YREDPVRMLRAVRFACKLGFMIEPSCEAPLTHMAPLLSEVPAARLFEEILKLFHSGYALN
AFEKLRHYGLFARLFPETDQILARQDHDFPITFVSRGLDNTDQRIAAGKSVAPQFLFAML
LWEPVRLRCQQLLDQGLAWPEAMALASHEVASRQQRRIAIPKRFGLPMREIWSLQPRLER
RQGKRSMALIGHPRFRAAYDFLLLRAEAGEVDAEVAEWWTRFQDVDAAERARMSGGTKRK
RRRRRKTSTAEAGGEVTSDHPSA
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgccaacgccgctgatcgttccacgtcctgagcataccatctcgcgggccaatatcagc
caaaatgcactcaaggtgctgtatcgtctgtcacaggctggtcaccaggcgttcctggtg
ggcggcggtgtgcgcgacttgctgctcggacatgagccgaaggacttcgatatcgccacc
gatgcgacgccggagcaggtacgctcggtgtttcgcaactgtcgcctcattggccgtcgt
tttcggcttgcgcacgtgtttttcggttccgagatcatcgaggtggccaccttccgcggc
gccccagccgcgcaggatactgatcctaatagtgatgctggtgatcgactggtcgaaaac
ggtattattctgcgcgataatgtctatggaaccatcgccgaagatgcgctgcgtcgcgat
ttcaccattaatgcgctgtattacaatattgccgacttttcgctggtggattacgcgggg
ggattggacgacattcgcgacggtcgcctgcgtttgattggcggcgatgccgaggcccgc
tatcgcgaagatccggtgcgcatgctccgcgccgtgcgtttcgcctgtaagctcggcttt
atgatcgaaccgtcctgcgaggcgccgttgacgcacatggctccgctgctgtccgaggtg
ccggcggcacggctgttcgaggaaatcctgaagctcttccatagcggctatgctctgaat
gcattcgaaaaactgcgtcactacggtctcttcgcgcggttgtttccagaaaccgatcaa
atcctcgcacgccaggatcacgacttcccgatcacctttgtcagccgtggcctcgacaat
accgatcagcgtatcgctgctggtaagtcggtggcgccgcagtttctatttgcgatgtta
ttatgggagccggtgcgcctgcgctgtcaacagctgttggatcaaggactggcctggccc
gaggccatggcgcttgcatctcatgaagtagcttcccgacagcaacgccggattgccatt
cccaagcgttttgggctgccgatgcgcgagatctggtctttgcagcctaggcttgaacgt
cgccagggcaaacgatccatggcgttgatcggtcaccctcgcttccgtgccgcttatgat
tttttattgttgcgcgccgaggctggcgaggtggatgctgaggtggccgagtggtggacg
cgtttccaggatgtcgacgccgccgaacgcgcgcgcatgtccggcggtaccaagcgcaag
cgacgtcgccgacgtaagaccagcactgctgaggccggcggtgaagtcaccagcgatcat
cccagcgcctag

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