Thiohalocapsa sp. PB-PSB1: N838_17010
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Entry
N838_17010 CDS
T07019
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N838_17010 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thip03019
]
N838_17010 (pcnB)
Enzymes [BR:
thip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
N838_17010 (pcnB)
Messenger RNA biogenesis [BR:
thip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
N838_17010 (pcnB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QQO57931
LinkDB
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Position
complement(3995862..3997193)
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AA seq
443 aa
AA seq
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MPTPLIVPRPEHTISRANISQNALKVLYRLSQAGHQAFLVGGGVRDLLLGHEPKDFDIAT
DATPEQVRSVFRNCRLIGRRFRLAHVFFGSEIIEVATFRGAPAAQDTDPNSDAGDRLVEN
GIILRDNVYGTIAEDALRRDFTINALYYNIADFSLVDYAGGLDDIRDGRLRLIGGDAEAR
YREDPVRMLRAVRFACKLGFMIEPSCEAPLTHMAPLLSEVPAARLFEEILKLFHSGYALN
AFEKLRHYGLFARLFPETDQILARQDHDFPITFVSRGLDNTDQRIAAGKSVAPQFLFAML
LWEPVRLRCQQLLDQGLAWPEAMALASHEVASRQQRRIAIPKRFGLPMREIWSLQPRLER
RQGKRSMALIGHPRFRAAYDFLLLRAEAGEVDAEVAEWWTRFQDVDAAERARMSGGTKRK
RRRRRKTSTAEAGGEVTSDHPSA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgccgctgatcgttccacgtcctgagcataccatctcgcgggccaatatcagc
caaaatgcactcaaggtgctgtatcgtctgtcacaggctggtcaccaggcgttcctggtg
ggcggcggtgtgcgcgacttgctgctcggacatgagccgaaggacttcgatatcgccacc
gatgcgacgccggagcaggtacgctcggtgtttcgcaactgtcgcctcattggccgtcgt
tttcggcttgcgcacgtgtttttcggttccgagatcatcgaggtggccaccttccgcggc
gccccagccgcgcaggatactgatcctaatagtgatgctggtgatcgactggtcgaaaac
ggtattattctgcgcgataatgtctatggaaccatcgccgaagatgcgctgcgtcgcgat
ttcaccattaatgcgctgtattacaatattgccgacttttcgctggtggattacgcgggg
ggattggacgacattcgcgacggtcgcctgcgtttgattggcggcgatgccgaggcccgc
tatcgcgaagatccggtgcgcatgctccgcgccgtgcgtttcgcctgtaagctcggcttt
atgatcgaaccgtcctgcgaggcgccgttgacgcacatggctccgctgctgtccgaggtg
ccggcggcacggctgttcgaggaaatcctgaagctcttccatagcggctatgctctgaat
gcattcgaaaaactgcgtcactacggtctcttcgcgcggttgtttccagaaaccgatcaa
atcctcgcacgccaggatcacgacttcccgatcacctttgtcagccgtggcctcgacaat
accgatcagcgtatcgctgctggtaagtcggtggcgccgcagtttctatttgcgatgtta
ttatgggagccggtgcgcctgcgctgtcaacagctgttggatcaaggactggcctggccc
gaggccatggcgcttgcatctcatgaagtagcttcccgacagcaacgccggattgccatt
cccaagcgttttgggctgccgatgcgcgagatctggtctttgcagcctaggcttgaacgt
cgccagggcaaacgatccatggcgttgatcggtcaccctcgcttccgtgccgcttatgat
tttttattgttgcgcgccgaggctggcgaggtggatgctgaggtggccgagtggtggacg
cgtttccaggatgtcgacgccgccgaacgcgcgcgcatgtccggcggtaccaagcgcaag
cgacgtcgccgacgtaagaccagcactgctgaggccggcggtgaagtcaccagcgatcat
cccagcgcctag
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