Candidatus Thiothrix singaporensis: HZT40_05970
Help
Entry
HZT40_05970 CDS
T06729
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
this
Candidatus Thiothrix singaporensis
Brite
KEGG Orthology (KO) [BR:
this00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
this03021
]
HZT40_05970 (rpoE)
Transcription machinery [BR:
this03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HZT40_05970 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
Phage_antitermQ
TnsD
Motif
Other DBs
NCBI-ProteinID:
QLQ31226
UniProt:
A0A7L6AQ47
LinkDB
All DBs
Position
1183582..1184157
Genome browser
AA seq
191 aa
AA seq
DB search
MGASLTDLELVQRVQSGDXKSFDILVIKYQHKVINLVLRYVHDHDTAEDVAQEAFIKAYR
GLKNFRGESAFYTWLYRIAINTAKNHLVSQSRRLPDIDIDADEAEQFSGESALKEYATPE
REMLTAEIQEVITQAIDGLPEDLRTAIILRELEGMSYEEIAVTMECPIGTVRSRIFRARE
SIDKVLRPLLG
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctagtctaactgacctcgaactggtgcagcgggtacagtcgggggataanaaa
tcattcgatattctagtcataaaatatcagcacaaggtcatcaatctggtgctgcggtat
gtccatgaccatgatactgctgaggatgtggcgcaggaagctttcatcaaagcgtaccgn
gggttgaaaaacttccgaggggaaagcgcattctatacctggctttaccggattgcgatc
aacaccgctaaaaatcatctggtgtcgcaaagccgccgtttacctgacatcgatattgat
gcagatgaggcggaacaatttagcggtgaatccgctctaaaggaatatgccacgcccgag
cgtgaaatgttgacggcggaaattcaggaagtcatcacccaagcgattgatggactgccg
gaagatttgcgcaccgccatcattttacgtgagctggaaggcatgagttatgaagaaatc
gcagtgacaatggaatgtccaataggtactgtacgttctcggattttccgggcgcgtgag
tcgattgataaagtattgaggccactactaggctaa
DBGET
integrated database retrieval system
