Candidatus Thiothrix singaporensis: HZT40_15550
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Entry
HZT40_15550 CDS
T06729
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
this
Candidatus Thiothrix singaporensis
Brite
KEGG Orthology (KO) [BR:
this00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
this03016
]
HZT40_15550 (rph)
Enzymes [BR:
this01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
HZT40_15550 (rph)
Transfer RNA biogenesis [BR:
this03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HZT40_15550 (rph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ham1p_like
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
QLQ32766
UniProt:
A0A7L6AUG6
LinkDB
All DBs
Position
3084417..3085733
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AA seq
438 aa
AA seq
DB search
MRPSERAPEQMRTITFTRHYTCHAEGSVLVEFGNTKVLCTATVEERLPAWLKGKGQGWVT
AEYGMLPRSTGSRTPREAAKGKQGGRTMEIQRLIGRALRAVVDLEALGEYQITLDCDVIQ
ADGGTRTASISGSYIALCDAISWLAKNRRLKKNPLHGQIASVSVGIYNGAPVLDLDYAED
SNAETDMNVVMNEAGQFIELQGTAEGHAFRRDELDAMLALAEKGIREIMQAQRXGAGSMS
RKIVLASGNAGKLREFNAMMADLGIEFVRQSELGVQDAEETGLTFVENALLKARNAAQHT
GMPAMADDSGIVVDALGGAPGLYSARYAGEHGDDAANNTKLLEALKDTPEAQRNARFYCC
IVYLRHVHDQLPIIAEASWEGRVLSAPSGANGFGYDPLFYVPTHGCSSAELPPEXKNRIS
HRAQALRKLHTLLEQAKA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaagcgaacgtgcgcctgagcagatgcgcaccatcacattcacccgccattac
acctgccatgcggaaggctccgttctggtggaatttggcaacaccaaggtgctctgcacc
gccaccgtcgaggagcgcctgcccgcatggttgaaaggcaaggggcaaggctgggtgacc
gccgaatacgggatgctgccgcgctccaccggctcccgcaccccacgtgaggccgccaag
ggcaaacagggcgggcgcaccatggaaatccagcgcctgatcgggcgggcgttgcgcgcc
gtagttgatctcgaagcgctcggcgaataccaaatcacccttgactgcgacgtcatccaa
gccgatggcggcacccgcaccgcctccatcagcggcagctacatcgcactgtgcgatgcc
attagctggctngcaaaaaaccgccgcctgaagaaaaatccgctgcacggccagattgcc
tccgtatccgtcggcatctacaacggcgcgccggtgctggatctggactacgcggaagac
tccaacgccgaaactgacatgaatgtggtcatgaatgaagccggtcaattcatcgagtta
caaggcaccgccgaaggccacgctttccgccgtgacgaactcgacgccatgctggcgttg
gcggaaaaaggcatccgcgaaatcatgcaggcgcaacggganggtgctggaagcatgagc
agaaaaatcgtcttggcgtccggcaatgcgggcaaactgcgtgaattcaacgccatgatg
gccgacctcggcatcgaattcgtgcgccagagtgaacttggcgtacaggatgcggaagaa
accggcctgactttcgtcgaaaacgccctgctcaaggcgcgtaacgccgcacagcacacc
ggcatgcccgccatggcggacgactcaggcatcgtggtggatgcgctcggcggcgcgccg
gggttgtattccgcccgctacgccggagagcacggtgatgacgcagccaataacaccaag
ctgttggaagcgctgaaagacacgccagaagcacagcgcaacgcccgtttctactgctgc
atcgtctacctgcgccacgtccatgaccagttgccgatcatcgccgaagccagctgggaa
ggccgggtgctgtccgcccccagcggtgccaacggcttcggttacgacccgctgttctac
gtgcctacgcatggctgttcttccgccgaactgccaccggaaganaaaaaccgcatcagc
catcgtgcgcaggcgttacgcaagctgcacacgctgctggagcaggcaaaggcatga
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