Thermococcus indicus: FH039_10295
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Entry
FH039_10295 CDS
T07099
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tic
Thermococcus indicus
Pathway
tic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FH039_10295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tic03021
]
FH039_10295
Transcription machinery [BR:
tic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
FH039_10295
Prokaryotic type
Archaeal type
TFB
FH039_10295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Sigma70_r4
FYDLN_acid
A2L_zn_ribbon
Cyclin_N
RUBY_RBDX
Trm112p
Prim_Zn_Ribbon
Zn_Tnp_IS1595
GerE
LysW-like_globular
FtrD-like
Auto_anti-p27
DZR
HTH_Tnp_ISL3
YceG
zf-Mss51
Motif
Other DBs
NCBI-ProteinID:
QDA31917
UniProt:
A0A4Y5SLX5
LinkDB
All DBs
Position
complement(1901571..1902482)
Genome browser
AA seq
303 aa
AA seq
DB search
MADKNVCPVCGSDKLFYDPRRGEIVCSVCGYVVQQNVVDEGPEWRAFDPDQRAKRARTGA
PMTLMIHDKGLSTDIDWRDKDIHGNQITGMYRTKMRRLRMWQRRMRINDAAERNLAFALS
ELDRMAAQMRLPRRVKEVAASLYRKAVMKKLIRGRSIEGMVSAALYAACRMESIPRTLDE
IAAVSKVTKKEIGRSYRFLARGLNLNLRPTSPIEYVDRFGDALNVSARTKKRAKEILREA
INRGITSGKGPTGLAAAALYVASLLEGEKKTQREVAEVAHVTEVTVRNRYKELVEKLNIN
VPI
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
ttggctgataagaatgtatgtccggtttgcggctccgataagctgttttatgacccgagg
agaggcgaaattgtctgttctgtctgcggttacgttgttcagcagaatgtcgtcgatgag
ggtcctgagtggcgcgccttcgaccccgaccagagggccaagcgcgccaggaccggtgcg
cccatgacgctgatgatccatgataagggcctctccaccgacatagactggcgcgacaag
gacatacacgggaaccagataaccggcatgtaccggaccaagatgcgccgtctgaggatg
tggcagaggagaatgcgcataaacgacgcggccgagcgtaacctcgcgttcgcgctgagc
gagctggacaggatggcggcacagatgcgtctcccgaggcgcgtcaaggaggtcgccgct
tccctctacaggaaggccgtcatgaagaagctcatccgcgggcgctcgattgagggaatg
gtctccgcggcactctacgcggcgtgcaggatggagagcattcccaggactctcgatgag
atagcggccgtttcaaaggtcacgaagaaggagataggaaggagctaccgcttcttagcg
aggggtctcaacctcaacctccgcccgaccagcccgattgagtacgttgaccgcttcggc
gacgctctaaacgtgagtgcccggacgaagaagagggccaaggagatactccgggaggcg
ataaacaggggcataacgagcggtaaggggccgacgggattggccgcggctgccctgtac
gttgcctccctcctggagggtgagaagaagacccagcgcgaggtggcggaggtagcgcac
gtaaccgaggtcaccgtgaggaaccgctacaaggagctggtggagaagctcaacataaac
gtcccgatatga
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