Thermincola potens: TherJR_0275
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Entry
TherJR_0275 CDS
T01226
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K27000
RNA polymerase sigma-H factor
Organism
tjr
Thermincola potens
Brite
KEGG Orthology (KO) [BR:
tjr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tjr03021
]
TherJR_0275
Transcription machinery [BR:
tjr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TherJR_0275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_16
GerE
HTH_38
HTH_23
Topo-VIb_trans
DUF1676
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ADG81162
UniProt:
D5X9U1
LinkDB
All DBs
Position
295581..296225
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AA seq
214 aa
AA seq
DB search
MSLSAQREVFDTFDVMLDEDIVEFAKEGDDAALEYLINKYKNFVRAKARSYFLIGADRED
IIQEGMIGLYKAIRDFKSDKLSSFRAFAELCITRQIITAIKTATRQKHIPLNSYVSLNKP
IYDEDSDRTLLDVISGSKITDPEELIISREEFDDIEEKMGEILSSLEWKVLMSYLEGKSY
QEIAVDLKRHVKSIDNALQRVKRKLERYLEKREN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaagtgctcagagagaagtatttgataccttcgatgtgatgttggacgaagat
atcgtagagtttgccaaagaaggtgatgatgccgctctagaatatttgatcaataagtac
aagaattttgtcagggccaaagctcgctcatacttcttaatcggagcagacagggaagat
atcattcaggaaggcatgattggactctacaaagccatccgtgatttcaaatcggacaag
ctttcatcattccgcgcttttgctgagttatgtattaccaggcagatcattactgccata
aaaacagctacccggcaaaagcacattcctttaaattcttacgtttccttgaacaagcct
atttatgacgaagattccgatcgtactctgctcgacgttatttccggttcaaagataaca
gacccggaagaactgattatcagccgggaagaatttgacgatatcgaggaaaaaatgggt
gaaatccttagttcgttagaatggaaagtactgatgtcttacctggagggtaaatcatat
caggaaatcgccgttgacttgaaaaggcatgttaagtctattgataatgccctgcagagg
gtaaaaaggaagttggaaagatatttggaaaaaagagaaaactag
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