Tetragenococcus koreensis: C7K43_02720
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Entry
C7K43_02720 CDS
T05710
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tkr
Tetragenococcus koreensis
Pathway
tkr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C7K43_02720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tkr03400
]
C7K43_02720
DNA repair and recombination proteins [BR:
tkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7K43_02720
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7K43_02720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_7
AAA_19
AAA_30
AAA_25
Kinesin
AAA_22
Microtub_bd
AAA_5
T2SSE
AAA
UB2H
Motif
Other DBs
NCBI-ProteinID:
AYW44935
UniProt:
A0A3G5F3M7
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All DBs
Position
562568..564550
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AA seq
660 aa
AA seq
DB search
MIEKELSHQFELVSNYQPSGDQPEAIEELTDGVLDHKKAQILLGATGTGKTYTISNVIQN
VNKPTLIIAHNKTLAGQLYGEFKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSI
NDEIDKLRHSATSSLLERNDVIVVASVSCIFGLGSPMEYQKQVVSLRQGMEISRDELLRS
LIDIQFERNDIDFQRGRFRVRGDVVEVFPASRGERALRIEFFGDEIDRIREVDALTGEIL
SETEHVSIFPATHFVTDEDHLETAIASIKQELETRLTVLKADNKLLEAQRLEQRTNYDIE
MLREVGYTSGIENYSRHMDGRKEGEPPYTLVDFFPEDFLIVIDESHVTMPQVRGMYNGDR
ARKQMLVDYGFRLPSALDNRPLRLEEFESHVNQIIYVSATPGPYEYEQTDTVVEQIIRPT
GLLDPLIEVRPIMGQIDDLVGEINERTERNERVFVTTLTKKMAEDLTDYFRELGIKVKYL
HSDIKTLERTEIIRNLRLGEFDVLVGINLLREGLDVPEVSLVAILDADKEGFLRSERSLV
QTMGRAARNADGKVVMYADKITDSMQNAMDETTRRRKIQEAYNEEHGIVPQTIKKDIRDL
ISISSVAEEGNNEQVSYDDLTKDEKEDLVGKLEIEMKEAAKSLDFEKAATLRDSILELKA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaaagagctatcacatcaatttgaactcgtttcaaattaccaaccgtcaggt
gaccagcccgaagcaattgaagaattaactgatggggtgttagatcataaaaaagctcaa
atccttttaggagctaccggaacaggtaaaacctacaccatttctaatgtgatccaaaac
gtaaataaaccaacgttaattattgctcataataaaacactagccggtcagttatacgga
gaatttaaagaatttttccctaataacgccgttgaatattttgtaagttactatgattat
tatcaacccgaagcttatgtgccatcaagtgacacttatattgaaaaagactccagtatt
aatgatgagattgataaattacggcactcggccaccagttcattattagaacgtaatgat
gtgattgtcgtggcttcggtgtcatgtatttttggattaggctctcctatggaataccaa
aagcaagttgtttctttgcgacaagggatggaaatttcaagagatgaattactacgttca
ttgattgatattcaatttgaacgcaatgatattgatttccaaaggggtcgttttcgggtg
cgtggcgatgtggttgaagtttttcccgcatcacgtggtgaacgagccttacgaattgaa
tttttcggagacgaaattgatcgtatccgtgaagtcgatgccctaactggtgaaattttg
agtgaaacagaacatgtttctattttcccagcaacgcactttgtgaccgatgaagatcat
ttggaaacagcgattgcttcgattaaacaagaactggaaacacgattgactgtcttaaaa
gcagacaataagttgttagaagcccaacgtttagaacaacggactaactacgatattgaa
atgctgcgagaagtaggatatacttcagggattgaaaattactctaggcatatggatggc
agaaaagaaggcgaaccgccatatacacttgtagactttttcccagaagatttcttaatc
gtgattgatgagtcacacgtgacgatgcctcaagttcgtggcatgtataacggagaccgc
gccagaaaacaaatgctggtggattatggttttcgtttgccttctgctttggataaccgt
ccgttaaggttagaagaatttgaaagccatgtgaatcagattatttatgtttcggcaacg
ccagggccttatgagtacgaacaaactgatacagttgttgaacaaattattcgaccgaca
ggcttgttagatccactcattgaagtacggcctattatgggacagattgatgatctggta
ggtgaaattaacgaacgtacagaaagaaacgagcgggtttttgttacgacgctgaccaaa
aaaatggcagaagatttgactgattatttcagagaattaggaataaaagttaagtacttg
catagtgacatcaagacactagaaagaactgaaattatccgcaatttgcgcttgggtgaa
tttgatgttttagtcggaattaacctattaagagaaggtttagatgtacctgaagtttct
ctggtagctatattagatgcggataaagaaggatttctacgtagtgagcgttctcttgta
cagaccatggggcgggcagctagaaatgcagatggtaaagtggttatgtatgccgataaa
attactgattctatgcaaaatgcgatggacgaaaccactcgtcgtcgtaaaattcaggaa
gcttataatgaagaacatggaattgttccgcaaaccattaaaaaagatattcgtgactta
atttcgatttcttctgttgctgaagaaggaaataatgaacaagtatcttacgatgacctt
actaaagatgaaaaagaagatttagtcggaaaattagaaatagaaatgaaagaagctgct
aagtcattggactttgaaaaagcagcaactttacgcgattcaattttagaattgaaagct
taa
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