KEGG   Thioflavicoccus mobilis: Thimo_1278
Entry
Thimo_1278        CDS       T02397                                 
Name
(GenBank) CRISPR-associated helicase Cas3, subtype Dpsyc
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
tmb  Thioflavicoccus mobilis
Brite
KEGG Orthology (KO) [BR:tmb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tmb02048]
    Thimo_1278
Enzymes [BR:tmb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Thimo_1278
Prokaryotic defense system [BR:tmb02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Thimo_1278
SSDB
Motif
Pfam: Cas3_HD DEAD HD Flavi_DEAD Helicase_C
Other DBs
NCBI-ProteinID: AGA90075
UniProt: L0GXH5
LinkDB
Position
complement(1390362..1393355)
AA seq 997 aa
MTERPLTGQDFADFFAALWHQSPFPWQSALAERLLAPDGTVSGDESGWPQAITLPTASGK
TACLDIALFALAAQAYRPAQGLTLTAPRRIFFVVDRRVIVDEAYARARMLAARLADPSPG
ILTEVAERLRGLAAGPANDETPDPLACFQLRGGIFRDDAWARSPTQPTIVCSTVDQIGSR
LLFRAYGRSFKAWPLQAGLVGNDSLILLDEAHCAQPFMQTLEAVARYRRWAERPLASPFR
LVVMTATPPAEVARFPDPATASANRAHLVLKRRLEASKPCRLEVAARAQGRDPARVNQAL
AEALVAEAGRLVEDYMSQADAQAPAVCLFCNRVDTARRAHALLARRHAGQAILLTGRMRP
FDKNNTLETELAPLAADRAEQRQLAAPLFVVSTQTLEVGANLDFDLMVSECADLSALRQR
FGRLNRMGRSIAARGVIVVRANQEKAESAPDPIYDRALQATWAWLAGQRDEAGEVDLGVA
AIEARLPADLGPLTRQAVEAPVLLPAHLDALVQTAPVPCPSPDVSLFLHGPQAGPADVQV
CWRADLSAEAEDAWIEAVALCPPATGELMPVPLAAIRRWLAGEPEGVDGGDIEGIAPAAD
DIEGVTERRVLRWRGREDAKVVGNPREIRPGDLLIIPAAAGGWDSLGHVPTGTRRFIDLG
DRGHWESRARAILRLTPESLDAWPQELAARARLRELVDEAKTRLEEEPATLAADLKTALV
DLSRDAEAASLPWLKDVAAHLASERHLERCIAPHPGRGLVLSSTRRLRNRPNTASIFSAE
DDVTASGTVHWPLMDHLAGAAAWARHYTDQLPKKIADDIALAALCHDLGKADPRFQTLLQ
GGTIWTKPELLAKSASLPHGRQAYEEAREKAGYPKGGRHELLSVRLLESAPNLLAQAHDP
ELVRHLIESHHGHCRPFAPVVDDPGPDHPISLAFQGHVLAHDGPTGLDRLDSGVAERFWR
LTRRYGWWGLAALAAALMLSDHRRSEWEERHASGDPT
NT seq 2994 nt   +upstreamnt  +downstreamnt
atgactgagcgacctctgaccggccaggatttcgccgacttcttcgcggcgctctggcac
caatcgccgtttccgtggcaaagcgcgctggccgaacggctgctcgcgcccgacgggacc
gtttcgggcgatgaatccggctggccgcaggccatcacgctgccgaccgcctcgggcaag
accgcctgcctcgacatcgcactgttcgccctcgccgcccaggcttatcgcccggctcag
ggcctgacgttgaccgccccgcggcggatcttcttcgtcgtcgatcgacgggtcatcgtc
gacgaggcctacgcacgcgctcggatgctcgccgcccggctggccgacccgagtccgggc
atcctcaccgaggtcgccgagcggctgcgcggcctcgccgctggcccggcgaacgacgaa
acgcccgaccccctcgcctgcttccagctgcgcggcgggatcttccgcgacgacgcctgg
gcgcgctccccgacccaaccgacgatcgtctgcagcaccgtcgaccagatcggctcgcgg
ctcctcttccgcgcctacggccggagtttcaaggcgtggccgcttcaggccggtctcgtt
ggcaacgacagcttgatcctgctcgacgaggcgcactgcgcgcagcccttcatgcaaacg
ctggaggccgttgccagataccgccgctgggccgaacgacccttggcctcaccgttccgg
ctggtggtcatgacggcaaccccaccggccgaggtcgcacgcttccccgacccggcgacg
gcctcggcgaatcgcgcccacctcgtgctgaagcgtcgcctggaggcgtccaagccttgc
cggctggaggtcgccgcgcgagcccagggccgcgatccggcccgggtcaaccaggcgctc
gccgaagcactggtcgccgaggccggacgcctggtcgaagactacatgagccaagccgac
gcgcaggcaccggccgtttgcctcttctgcaaccgcgtcgacacggctcgccgcgcccac
gccctgctcgcccgccgccatgccgggcaggcgatcctcctgaccgggcgcatgcgacca
ttcgacaagaacaacacgctggagacggagctcgcaccgctcgccgccgatcgcgcggag
caacgacagctcgcggcgccgctcttcgtcgtctcgacccagaccctcgaggtgggggcg
aatctcgacttcgacctgatggtcagcgagtgcgccgacctctcggcgctgcgccagcgc
ttcgggcgcctgaaccggatgggccgttcgatcgctgcgcgcggcgtcatcgtcgtccgc
gccaatcaggagaaggccgagagcgcccccgatccgatttacgacagggcgctccaggcg
acctgggcctggctcgccggccaacgcgacgaggccggcgaagtcgatctcggcgtcgcc
gcgatcgaggcacgcctgccggccgacctcggcccgctgacgaggcaggcagtagaggcc
ccggtgctgctcccggcccacctggatgccttggtccagaccgcgccggttccctgcccg
agccccgacgtctcgctgttcctgcatgggccgcaggcgggaccggcggacgtgcaggtc
tgctggcgggccgacctgtcggcggaggccgaggacgcctggatcgaggccgtcgcgctc
tgtccgccggccaccggcgagctgatgccggtcccgctagcggccattcgccgctggctc
gccggcgaaccggagggggtggatgggggtgacatcgaaggcatcgcgcctgcggccgac
gatatcgaaggcgtaacggagcgccgagtactgcgctggcgcggaagggaagatgccaag
gtcgtcggcaacccgcgcgagatccgccccggtgacctcctcatcattcccgctgcggcc
ggcggctgggacagcctcggccatgtcccgaccggtacacgccgcttcatcgatctgggc
gaccgcggtcactgggagtcgcgcgcccgggcaatcctgcggctcacaccggagagcctc
gacgcatggccgcaggaactcgctgcacgagcacggctacgcgaactcgtcgacgaggcg
aagacccgcctcgaagaggagccggccaccctcgctgccgacctcaagaccgcgctcgtc
gacctgagccgcgacgccgaggcagcctccttgccctggctgaaagacgtcgccgcccac
ctcgccagcgagcggcatctcgagcggtgcattgcccctcatcctggcagggggctcgtc
ttgtcgagcaccaggcgactgcgcaaccgcccgaacacggcttcgatctttagcgccgag
gacgatgtaaccgcatcgggaacggtccattggccgctaatggaccatctcgcgggtgcc
gccgcatgggcacgacactacacggaccagctccccaagaagatcgccgacgacattgcg
cttgccgccctgtgccacgatctaggcaaggccgacccgcgctttcaaacccttctgcag
ggcggcactatctggaccaagcccgagctgctcgccaaatcggccagcctgccacatggc
cggcaggcctacgaagaggcccgcgaaaaggccggctacccgaagggcggccgccacgag
ctactgtcggtccgattgctggagagcgccccgaacctgctcgcccaggcccatgatccg
gaactcgtccggcacctgatcgaaagccaccacggccattgccggccgttcgccccggtc
gtcgacgatcccggccccgaccatcccatcagcctggcatttcagggccacgtgctcgct
cacgatggaccaaccggactcgaccgactcgacagcggggtggccgagcgcttctggcgc
ctgacacgccgctacggctggtggggactcgccgcactcgccgccgccttgatgctctcc
gaccatcgccgtagcgaatgggaggaacgccatgccagtggagatccgacatga

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