Thermocaproicibacter melissae: NOG13_02380
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Entry
NOG13_02380 CDS
T09029
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
tmel
Thermocaproicibacter melissae
Pathway
tmel00550
Peptidoglycan biosynthesis
tmel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tmel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NOG13_02380
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tmel01011
]
NOG13_02380
Peptidoglycan biosynthesis and degradation proteins [BR:
tmel01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NOG13_02380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
Aida_C2
Motif
Other DBs
NCBI-ProteinID:
WBY64572
LinkDB
All DBs
Position
473150..475351
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AA seq
733 aa
AA seq
DB search
MAKGKTVRTWRRTMIILILLVGVGFGAVIFSLVKLQLIQGPELQKRATDQQLKDTTLSAK
RGTIYDCNMKELAKSATVWDVILEPAYITDKNRDVIASGLSEILGINKDEIVKRSQKKTY
YEILKSKVEEDVRNKILEFKSKNNITSGIRLEENYKRYYPYGKFAATVLGFTGTDNQGLA
GVEAEYDSELTGTPGRLVTAQNAVGTDMNFQYEQEVAAKDGDSLVLTIDEVIQHYVEKYL
AEGIANNKVQNRGCAIVMNVKTGAILAMAVKGDFDPNNPFVIDDPQKAAEIEAITDPDKK
SEAKQKALQEQWRNKCISDVYFPGSVFKMITASAALEEKLVSEDTPFNCPPYLVIGDRKI
KDWKTFGHLTFAEGICQSSNVVFMQVGQRLGAQLLFKYFDAFGFTQKTGIDLPGESRSIY
ITAENMTPVDLACISFGQSNSITPIQMITAACAVANGGYLVQPHIVEKIIDSNGNIVKTA
DTTPKRQVISKETSQRMCKILQQDAKTGTAKSGYIAGYRVCGKTGTSEKQGMAKGEYIAS
YCGFAPAEDPEIAMLVFYDQPHGPNGYYGSPVAGPTFLATMTQVLPYIGVQPQYTEEELA
KLDGKAPNVVGKTVDAAKNQVAQEGLQAKVYGDGNTVVSQIPEAGKSIPKKGTVVLFTDK
NSAAQTVTVPNLVNLTLSEANQRAAEAGLNISIAGAALTSSSAVSSTQSIAEGTKVAPGT
VITVTFSEKNQVA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagggaaaacggtcagaacatggcgcagaacaatgatcatcctgattctgctg
gtgggggtcggttttggcgccgtcatcttcagcttagtgaagctgcagctgattcaaggc
cctgaactccagaaacgcgccaccgatcaacagttgaaagacactacgctttcggcaaag
cgcggaacaatttacgactgcaacatgaaggaactcgctaagagcgctactgtctgggac
gtaatccttgagcccgcctatattaccgataaaaaccgcgatgttattgcgtcgggcctg
tcggaaattctcggtattaacaaggatgagattgtaaaacgcagtcaaaaaaagacgtac
tatgagattctgaaaagcaaagtcgaggaagacgtccgcaataagattctggaattcaaa
tcgaaaaataatatcacgagcggaatccgcttggaagaaaactataaacggtactatcct
tacggaaaatttgccgccactgtgctcgggtttaccggcacggacaatcagggcctcgcc
ggagtagaagcagagtatgacagcgaactcaccggcacgcccggacgcctcgtcacggca
cagaacgccgtcggcaccgatatgaacttccaatatgagcaggaagttgccgcaaaagac
ggcgacagcctcgtccttaccattgatgaggtcattcagcattatgtggaaaaatacctc
gctgagggcatcgcaaacaacaaggtccaaaaccgcggatgcgctattgtcatgaatgtc
aagaccggtgctattctcgcaatggccgtaaagggcgattttgaccccaataatccgttt
gtcattgacgatccccaaaaagcagcggagattgaagcaattacagacccagataaaaaa
agcgaagccaagcagaaagcacttcaggagcagtggcgcaacaagtgcatcagcgatgtg
tatttccctggttccgttttcaaaatgattaccgcttcggcggccttggaagagaaattg
gtgtcggaggataccccgttcaactgcccgccatatttggtaattggcgaccgaaaaatt
aaagactggaaaaccttcggccatttgacctttgcggaaggaatctgccagtccagcaac
gtcgtctttatgcaggtgggtcagagactcggggcacaactcctcttcaaatactttgat
gcgttcgggtttacccaaaaaacgggaatcgaccttccgggtgaatcgcgaagcatctat
attaccgccgagaatatgacaccggttgaccttgcgtgcatatccttcgggcagtccaac
agtattacaccaatccagatgattacagcggcgtgcgcggttgcaaacggcggatatctt
gttcagccgcacatcgtcgaaaagattatagacagcaacggaaacatcgtcaaaactgct
gacacgactccgaaacgccaagtgatttctaaagaaacctcacagcgtatgtgcaaaata
ttgcaacaagacgccaagaccggcaccgcgaagagcggatatattgccggttaccgtgtc
tgcggcaaaacgggaacttccgaaaagcaaggcatggcgaaaggagaatatatcgcgtct
tactgcggctttgcgcccgcggaagatccggaaatcgccatgctggtcttctatgaccag
cctcatggcccgaacggatattacggcagtccggttgccggcccgacttttctggcgact
atgacgcaggttttgccctatatcggtgttcagccgcagtatacggaggaagaacttgca
aaactcgacgggaaagctccgaatgttgtcggcaaaacggttgacgcggcaaagaatcaa
gtggctcaggaaggcctccaagccaaagtctatggggatgggaataccgtcgtttcccag
attccggaggcaggaaagtccataccgaagaaaggcacggttgtactgtttaccgataaa
aactctgccgcacaaactgttacggttcccaatcttgtgaatctgaccctttccgaagcg
aaccaaagagcggcggaagcgggtttgaatattagcattgcaggtgccgcattgaccagc
tcaagcgcagtctcgtccacgcaaagcattgcggaagggacgaaggtggctccgggcacg
gtgataaccgtgacattctccgaaaagaatcaggtggcctaa
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