Tenacibaculum mesophilum: F9Y86_14315
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Entry
F9Y86_14315 CDS
T06242
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
tmp
Tenacibaculum mesophilum
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmp03009
]
F9Y86_14315
Enzymes [BR:
tmp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
F9Y86_14315
Ribosome biogenesis [BR:
tmp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
F9Y86_14315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
GNVR
Motif
Other DBs
NCBI-ProteinID:
QFS29517
LinkDB
All DBs
Position
3139613..3140647
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AA seq
344 aa
AA seq
DB search
MQEDNTPEIENDDLFEHHRFVATDGQVPLRVDKFLMNFIENATRNKIQQAAKAGNVLVND
VAVKPNYKVKPKDIVRVVLTYPPHENLLVAEDIPIDIVYEDDEVIVVNKPAGMVVHPGHG
NYSGTLVNGLIHHIENLPTNSNERPGLVHRIDKDTSGLLVVAKTEYAMAHLSKQFFDRTT
ERLYYALVWGNIEEDEGTIEGNIGRSFKNRLQMDVFPDGEHGKHAVTHYKVLERLTYVTL
VQCKLETGRTHQIRAHFKHIGHTLFNDERYGGNAILKGTTFTKYKQFVDNCFKVLPRQAL
HAKTLGFTHPTTGEFLQFNSEVPEDITACLEKWRTYSEHSKLEE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaagataacactccagagatagaaaatgatgatttattcgagcaccataggttt
gtagcaacagatggtcaagtaccattgcgagtagataagtttttaatgaactttattgaa
aatgcaactcgaaataaaatacagcaagcagctaaagcaggaaatgttttagtaaatgat
gtagcagtaaaaccaaactacaaagtaaagcctaaggatattgttagggtggtattaaca
tatccacctcacgaaaacttattagtagcagaagatattcctattgatatagtatatgag
gatgatgaagtaatagtggtgaacaagccagcaggtatggtagttcatcctggccatgga
aattactctggaacattagtgaacggactaattcatcacatagaaaacttaccaaccaac
tctaatgaacgtcctggtttagtacatcgtattgataaagatacaagtggattattggta
gttgcaaaaacagaatacgcaatggcacatttgtctaagcagttttttgatcgtactact
gaacggttgtattatgctttagtttggggaaatattgaagaggatgaaggaactattgaa
ggaaatataggacgtagttttaaaaatcgcttacaaatggatgtctttcctgatggtgag
catggtaagcatgctgttactcattataaagtacttgaaagacttacgtatgtaaccttg
gtacaatgtaagttagaaacgggtagaacgcatcaaattagagctcactttaaacacatt
ggacatacactttttaacgatgaacgttatggtgggaatgctattttaaagggaactacg
tttactaaatacaaacaatttgtagataattgctttaaagtgttgccaagacaagctttg
catgcaaaaactttaggttttacacatccaacaacaggagagtttttacaatttaactct
gaagtaccagaagatattaccgcttgtttagaaaaatggcgaacttattcagaacattca
aaattggaagaataa
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