Tremella mesenterica: TREMEDRAFT_35014
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Entry
TREMEDRAFT_35014 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_35014
Enzymes [BR:
tms01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TREMEDRAFT_35014
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TREMEDRAFT_35014
Prokaryotic type
TREMEDRAFT_35014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
18492651
NCBI-ProteinID:
XP_007007510
JGI:
Treme1_35014
UniProt:
R7SCF4
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MPKAPNNPPLPLNGLFPIAKPSGPTSMKVIDAITPLLLESRLFDDPERRKHGMSTQKRKR
KKNTTHMGLKIGQGGTLDPLADGVLVIGVNRGTKHLNRFLECTKEYTSTGLLGAATTTYD
AEGEILTTSKWDHITREDVEKAIEKFQGEIIQTPPIFSALKMDGKPLYEYARSSLPLPRA
IPTRKCTVHVELLSFTPSSVTPNDGGHNYRWPTTRLSSEQKTIFQRLTTLVHQAQEKEHL
AEPPIPDLNLQADITSEVLEDGRRPPTFEIKMTVSSGTYVRSIINDIGLLLGCGAHVVKL
TRTRQGEFTLYDEEKLDHDVSVKKEEESSNDVGVKKEEESSENTTACIPWEIWERAIEAR
KQRGGKMKKEEEVDEEEAMGNGEVEEELKEWEKEVLRRFVPVPVPISGTNSRDGPLMRYP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagctccgaataatccacctctaccacttaatgggttattccccattgctaaa
ccctcaggacccacatcgatgaaagtcatcgacgctatcacacctcttttacttgaatct
cgtctgttcgacgatcccgaaagacgaaaacatggtatgtctactcaaaaacgtaaaagg
aagaagaacaccacgcatatgggattgaaaattggtcaagggggaacattagatcctcta
gctgatggtgtattggtcatcggcgttaataggggtacgaaacatctcaatcggtttttg
gaatgtaccaaggaatatacttctactggactattaggagctgcgactacgacatatgac
gcagaaggggagattctgactacttccaaatgggatcatataactcgggaagatgtcgaa
aaggccattgagaaatttcaaggagagatcatacagactcctcctattttctccgctttg
aaaatggacggtaaaccattatatgaatacgcacgttcttctctacctctccctcgtgcc
atccccactcgaaaatgtaccgtccatgtggaacttttatcctttaccccatcttcggtc
accccaaacgatggaggacataattaccgttggcccactacgcgtttgtcttcagaacag
aaaacgatatttcaacgattgacaactttggttcatcaagcacaggagaaagaacatttg
gccgaaccccccatcccggatctcaatcttcaagctgatataacatcagaagtccttgaa
gatggaaggagacctccgacctttgagatcaaaatgacagtttctagtgggacatatgtg
agaagtatcattaatgatataggattgttattaggatgtggggcacatgtggtaaaattg
acaagaaccagacaaggagagtttacattgtatgatgaggaaaagttggatcatgatgtg
agtgtgaaaaaggaggaagagtcgagtaatgatgtgggagtgaaaaaagaagaagaatca
agtgagaataccacagcttgtatcccttgggaaatatgggaaagagctatagaagctcgt
aaacaacgaggaggcaagatgaagaaggaagaagaagttgacgaagaagaagccatgggg
aatggtgaagttgaggaagaattgaaggaatgggaaaaagaagttttgagaagattcgtc
cctgtccctgtgccaatatcggggacgaattcgagagatggaccattgatgaggtatcca
tga
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