KEGG   Tremella mesenterica: TREMEDRAFT_56482
Entry
TREMEDRAFT_56482  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
tms  Tremella mesenterica
Pathway
tms03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TREMEDRAFT_56482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tms03019]
    TREMEDRAFT_56482
   03041 Spliceosome [BR:tms03041]
    TREMEDRAFT_56482
Messenger RNA biogenesis [BR:tms03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     TREMEDRAFT_56482
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     TREMEDRAFT_56482
Spliceosome [BR:tms03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    TREMEDRAFT_56482
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 18493948
NCBI-ProteinID: XP_007002626
JGI: Treme1_56482
LinkDB
Position
Unknown
AA seq 223 aa
MSGAKVYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEI
SIQQMNEQPLDGRNIRVNMANAKPAGGGGGGFGGGGGGGYGGGGYNSGYGGGGEGGQGGY
GGGGGRGGYGGGGGYGGGGQGGYGGGGYGGQQGGGGYSGGYGGQGGYSGGASGGYGGQQG
YGGQQSYGGGQGNYGAAPAAQGSGDYAQGGAQSNQYGSGSGQY
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtccggcgcaaaagtctatgttggcaatctttcgtggaacaccacggatgacactctt
cgcgacgcttttatgcaatttggtcaagtactcgacagcatcgtcatgaaagatcgtgag
accggccgttctcgtggatttggttttgtcaccttcagtactgctgaggaagctgagatc
tccattcaacaaatgaacgagcaaccgcttgatggtcgtaacatccgagtcaacatggca
aatgctaaacccgccggcggtggtggtggcggcttcggtggtggtggtggcggcggttac
ggtggtggcggatacaactctggctatggcggtggtggtgaaggaggtcaaggtggctac
ggaggtggtggtggccgaggaggttatggaggcggtggtggctacggtggcggtggtcaa
ggtggatatggcggcggtggctatggtggccagcaaggtggtggcggctactctggcggc
tacggcggtcaaggtggctatagtggcggtgccagtggcggctacggtggtcaacaaggt
tatggcggccaacaaagctacggcggtggccagggtaattacggcgctgctcctgctgcc
caaggctcaggcgactacgcccaaggtggagctcaaagcaaccaatacggctctggttcc
ggccagtactaa

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