Tremella mesenterica: TREMEDRAFT_72714
Entry
TREMEDRAFT_72714 CDS
T03139
Definition
(RefSeq) hypothetical protein
KO
K10865
double-strand break repair protein MRE11
Organism
tms
Tremella mesenterica
Pathway
tms03440
Homologous recombination
tms03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TREMEDRAFT_72714
03450 Non-homologous end-joining
TREMEDRAFT_72714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tms03032
]
TREMEDRAFT_72714
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_72714
DNA replication proteins [BR:
tms03032
]
Eukaryotic type
DNA Replication Termination Factors
Other telomere regulation proteins
MRN complex
TREMEDRAFT_72714
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
TREMEDRAFT_72714
BRCA1-C complex
TREMEDRAFT_72714
NHEJ (non-homologous end-joining)
MRX complex
TREMEDRAFT_72714
SSDB
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Metallophos_2
Other DBs
NCBI-GeneID:
18498806
NCBI-ProteinID:
XP_007002131
JGI:
Treme1_72714
LinkDB
Position
Unknown
AA seq
706 aa
MVGPSQRSRRADSADPEITPSIIQQDPDNCFRILLATDNHIGYAEKDPVRGQDAINTFRE
ILQIAKEADVDFILLAGDLFHENRPSRTCMHQTIALLREYTMGDKPISFELMSDPMEGST
PGFSFPAVNYEDPNLNISIPVFSIHGNHDDPQGTGPEGALCALDVLSVSGVLNYFGKLDL
TADEAAADPSDQGIKIRPVLIRKGNTHLAMYGVGNVKDARMHYELRSNRVKMFMPDGGGE
VRDDDWFNMLLIHQNRVKHGPQQSVPEGMFDDSINLVIWGHEHDCRIWPERVEGKDYYIS
QPGSSVATSLAPGEAIPKHVGILSIQGSQFQIAEIPLKTVRPFVIEEVVLTEAAANPRNK
INLEERDTITSFLRAQVERLIAKAREEWEELHSGDDEEMMLPLIRLKVETSEVKEMTNPV
RFGQDFVGRVANPRDILQYYRKKKIAERKPQNRPDAPDIEDDDEDWGPDDLAAMTTNDRL
SKLRMATLVRQYLQAQNLEVLVENGLEDAIMRFVDKDDRDAIKDFVVDTVKTVGRDMRTK
EVDEDDVEEHMVRAKEMYERSQSRVASQWETEHKGREDNSKSRKAKNRPKDSDEDSMAAE
DSRMEVDSEASFQQSSAVGRGRTTSSTGTKSRAKGKQPLFDQDDEEEEEEVVPVKRKVPA
STSKTKPPAKTTTKKTPAKTNTKQAQLTFGKKPTGKAKPIELSDDD
NT seq
2121 nt
+upstream
nt +downstream
nt
atggtaggtccaagtcaacgttcccgaagggccgattccgccgacccggaaataacccct
tccatcatacaacaagaccccgacaactgcttccgtatcctactggcaacggataatcat
ataggatacgctgaaaaagatccagttagaggacaagacgctatcaatacttttcgtgaa
atcctccagattgccaaagaggcagatgtggatttcatcctcctagcaggtgacttattt
catgagaatcgaccaagtcgaacatgtatgcatcagaccatcgccttgcttcgggaatat
accatgggcgataaaccgatttcattcgaattaatgagtgatcctatggaaggtagtaca
ccgggtttctccttcccagcagtcaattacgaagatccaaatttgaatatttctatacct
gtcttttcgatacatgggaatcatgatgatccgcaaggtactggacctgaaggtgctcta
tgcgctttggatgtgctctcggtgtctggagtgcttaattactttggcaaactcgacctt
acggcagatgaagcggctgccgacccttccgaccaagggataaagatccgaccagtcctc
atacgcaagggaaacacacacctggcaatgtatggagttgggaatgtcaaagatgccaga
atgcactatgagcttcgaagtaatcgagtcaaaatgttcatgccggatggaggtggggaa
gtcagagatgacgattggttcaatatgttgctgatacaccaaaatcgcgtcaaacatggt
cctcaacaatcggtcccagagggcatgtttgatgattctatcaacctcgtgatatgggga
cacgaacatgattgtcgtatctggcctgagagggtagaagggaaagactactatatttct
cagccgggaagttcagtagcgaccagcttagctccaggagaagctatcccaaaacatgtt
ggcatattgtcaatacaaggcagtcaattccaaattgccgagataccactaaagacggtt
cgaccgtttgtgatcgaggaagtcgtcttgacagaagctgctgcgaatccaagaaacaaa
ataaatctggaggagcgagacacaataacgtccttcctacgtgcgcaggtggagagactc
atagccaaggctagggaagaatgggaagagctgcattccggtgatgatgaggagatgatg
ttgccactcatcagactgaaagtagagacgtccgaggtcaaggaaatgaccaatccagtc
cgattcggtcaagacttcgtaggccgtgttgccaaccctcgcgatattttgcaatactat
cgcaagaagaaaatagctgaaagaaagccccaaaaccggcccgatgccccagacatcgaa
gacgacgacgaagattggggacccgatgatctggccgctatgacgaccaacgatcgattg
tccaaattgaggatggcgacgcttgtcaggcaatacctacaagcgcagaatctggaggtg
ttggtggagaatgggctggaggacgccatcatgcgtttcgttgacaaagacgatagggat
gcgatcaaagattttgttgtggacactgtcaaaactgtgggaagggatatgcggacgaag
gaagtggatgaagatgacgtggaagagcatatggttcgggcgaaagagatgtatgagagg
tctcaaagccgtgtagcttctcaatgggagacggagcacaaaggtcgggaagataactcg
aaatcaaggaaagccaagaataggccgaaagactcagacgaggatagtatggctgctgaa
gatagcaggatggaagtcgactctgaagcttcgtttcagcaaagcagtgcggtaggtcgt
gggagaaccacgtcatctaccgggacgaaaagtcgggccaaaggaaaacaaccattattt
gaccaagatgacgaagaggaagaagaagaggtcgtacccgtcaaaagaaaggtcccagct
tccacatccaagaccaaacctcctgctaaaacgacgaccaagaaaactccagctaaaaca
aataccaaacaagcacaattgacgttcggaaagaagccgacgggaaaagcaaagccaatt
gaactgtccgatgatgattga
DBGET
integrated database retrieval system
