Thermoanaerobacter mathranii: Tmath_1936
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Entry
Tmath_1936 CDS
T01250
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K27000
RNA polymerase sigma-H factor
Organism
tmt
Thermoanaerobacter mathranii
Brite
KEGG Orthology (KO) [BR:
tmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmt03021
]
Tmath_1936
Transcription machinery [BR:
tmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tmath_1936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_16
GerE
HTH_23
HTH_30
HTH_38
Lebercilin
Sigma70_ECF
HTH_36
DUF3232
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ADH61623
UniProt:
D7AS58
LinkDB
All DBs
Position
complement(1946014..1946658)
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AA seq
214 aa
AA seq
DB search
MKSGAQQDYYQTYDQMEEEEVVFRAQKGDEAALEYLLERYKSFVKAKARAYFLVGADKED
IMQEGMIGLYKAIRDYKSDKLSSFKAFAELCVTRQIITAIKTATRQKHIPLNSYISLNKP
IFDEESDRTLLDVVSTQCIADPEELIISKEEYVNIENKMEELLSGLEWEVLVSYLDGKSY
QEIAEDLNRHVKSIDNALQRVKRKLERYLEMRNS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatctggggcgcagcaggattactatcaaacatatgaccaaatggaagaggaggag
gtagtttttagagctcaaaaaggagacgaagccgctttagagtaccttcttgagaggtat
aaaagctttgtaaaagcaaaggctcgcgcctattttttagtgggtgccgataaggaagac
attatgcaagaagggatgataggtctttacaaagcaataagagattataaaagtgacaag
ctctcctctttcaaagcttttgcggagttatgcgtgactcgtcaaattattactgccatt
aaaactgcaacgagacagaagcacataccgcttaattcttatatttccctcaataagcct
atctttgatgaagaatctgataggactcttttggacgttgtttctacccaatgtattgct
gaccctgaggagttaataataagtaaagaagaatacgttaacattgaaaacaaaatggaa
gaattattaagcggattagagtgggaggtcttggtatcatatttagatggcaagtcttat
caagaaattgcggaagatctaaataggcatgttaaatctatagacaatgcattacagcgg
gtaaaaagaaaattagaaaggtatcttgaaatgagaaacagctaa
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