KEGG   Trichechus manatus latirostris (Florida manatee): 101346702
Entry
101346702         CDS       T05135                                 
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu01524  Platinum drug resistance
tmu03430  Mismatch repair
tmu05200  Pathways in cancer
tmu05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    101346702
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101346702
  09162 Cancer: specific types
   05210 Colorectal cancer
    101346702
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    101346702
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmu03400]
    101346702
DNA repair and recombination proteins [BR:tmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     101346702
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27
Other DBs
NCBI-GeneID: 101346702
NCBI-ProteinID: XP_004369541
UniProt: A0A2Y9D7R5
LinkDB
Position
Unknown
AA seq 934 aa
MAVQPKETLQLESVAEAGFIRFFQGMPEKPTTTVRLFDRGDFYTVHGEDALLAAREVFKT
QGVVKYLGPAGAKTLESVVLSKMNFESFVKGLLLVRQYRVEVYKNKAGNKASKENDWYLA
FKASPGNLSQFEDILYGNNDMSSSIGVVGIRTSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLVQIGPKECVLPGGETAGDMGKLRQVILRGGILITDRKRTEFSTKDIYQD
LNRLLKAKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFNQYM
KLDIAAVRALNLFQGSLEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQNCYQVYQGINQLPNVIQA
LEKYEGKHQSLLLAIFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLTE
LREVMDDLEKKMQSALISAARDLGLEPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFT
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIINISSGYVEPMQILNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILKKGQGRILLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIVTGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATRIGAFCMF
ATHFHELTALASQVPTVSNLHVTALTTEETLTMLYQVKKGACDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGESRDYGETEPAAKRCYLERERGEKIIQEFLSKVKQVPFTEMS
EEAITVKLKQLKAEVIAKNNSFVNEIISRIKVTA
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggcggtgcaaccgaaggagactctgcagctggagagcgtggccgaggccggctttatt
cgcttcttccagggcatgccggagaagccgaccaccacggtgcgcctcttcgaccgaggc
gacttctacacggtgcacggcgaggacgcgctgctggctgcccgggaggtgttcaagacc
cagggggtggtcaagtacctggggcctgcaggagcaaagactctggagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaaggtcttcttctagtccgtcagtatagagtt
gaagtttacaagaataaagctggaaataaggcctctaaggagaatgattggtatttggca
tttaaggcttctccaggcaatctttctcagtttgaagacattctgtatggtaacaatgat
atgtcatcttccattggagttgtgggtattagaacatccacagttgatggccaaaggcag
gttggagttgggtatgttgactccatacagaggaagctgggattgtgcgagttccccgat
aatgatcagttctccaatcttgaagctctcctggttcagattggacccaaggaatgtgtt
ttaccaggaggagagactgccggcgacatgggaaaactgaggcaggttattctgagagga
ggaattctgatcacagacagaaaaagaactgaattttccacaaaagatatttatcaggat
ctcaaccggttgttgaaagccaaaaagggagaacagatgaatagtgctgtcttgccagaa
atggagaatcaggttgcagtttcatcgttgtctgcagtaatcaagtttttagagctctta
tcagatgattcaaactttggacagtttgaactgactacttttgatttcaaccagtacatg
aaattggatattgcagcagtccgagcccttaaccttttccagggttctcttgaagatacc
agtggctctcagtctctggctgcattgctgaataaatgcaaaacccctcagggacaaaga
ttggttaatcagtggattaagcagcctctcatggataagaaccgaattgaagagagatta
aatttagtggaagcttttgtagaagatgcagaattgaggcagactttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgctaagaaatttcaaagacaagcagcaaac
ttgcaaaactgttaccaagtctatcagggtataaatcaactccctaatgttatacaggct
ctggaaaaatatgaaggaaaacatcagtcgttgttgctggccatttttgtgactcctctt
attgatcttcgttctgatttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccctcttttgatcctaacctgactgaa
ttaagagaagtaatggatgacttggaaaagaagatgcagtcagcgttgataagtgcagcc
agagatctaggcttggaacctggcaagcagattaaactggattccagtacacagtttgga
tattactttcgagtaacctgtaaggaagaaaaagtccttcgtaataataaaaactttact
acagtagatatccagaagaatggtgttaaatttaccaacagtaaattgacttctctcaat
gaagagtataccaaaaataaaactgagtatgaggaagcccagaatgccattgttaaagaa
atcatcaacatttcttcaggctacgtagaaccgatgcagatactcaatgatgtgttagct
cagctagatgctgttgtcagctttgctcatgtgtcaaatggagcccctgttccatatgta
cgaccagtcattttgaagaaaggacaaggaagaattctgttgaaagcatctagacatgct
tgcgttgaagttcaagatgaagttgcatttattcccaatgatgttcattttgaaaaagat
aaacagatgtttcacatcgttactggccccaatatgggaggtaaatcaacatatattcgc
caaactggggtgatagttctcatggcacagattgggtgtttcgtgccatgcgagtcagca
gaagtgtccattgtggactgcatcttggctcgggtaggggctggtgacagtcagttgaaa
ggagtctccacgttcatggctgaaatgttagaaactgcctctattctcaggtctgcgacc
aaagactcattgataatcatagatgaattgggaagaggcacctccacctacgatggattt
gggctggcgtgggccatatcagagtacatcgccacacggattggtgcgttttgcatgttt
gcaacccacttccatgaacttactgccttggccagccaggtaccaacggtcagtaatcta
cacgtcacagcactgaccactgaagagaccttgactatgctgtatcaggtgaagaaaggt
gcctgtgatcaaagttttgggattcacgtggcggagcttgctaatttccctaggcacgta
atagaatgcgctaagcaaaaagccctggaactggaggagtttcaaaatatcggagaatct
cgagactatggcgagacagaaccagcagcaaaaagatgctatctggaaagggagcgaggt
gaaaaaattattcaggagtttctatccaaggtgaagcaagtgccctttactgaaatgtcg
gaagaagccatcacagtgaagttaaaacagctgaaagctgaggtgatagcaaagaataat
agttttgtcaatgaaatcatttcacgaataaaggttactgcataa

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