Tetraodon nigroviridis (spotted green pufferfish): GSTEN00024106G001
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Entry
GSTEN00024106G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K08527
retinoic acid receptor alpha
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00024106G001
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tng03310
]
GSTEN00024106G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
GSTEN00024106G001
Nuclear receptors [BR:
tng03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
GSTEN00024106G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-ProteinID:
CAG04399
UniProt:
Q4S4N3
LinkDB
All DBs
Position
2
AA seq
689 aa
AA seq
DB search
MAGKGNPVPGPHLNGFPVPAYSYFFPHMLGSLSPPGLPGLPISGYSTPSPASKAFSTGQR
NGIDTSDSPSQSSVKKEEIKARQERDLSSSSWAEVSQSGEKIAGIRPSLKYFQNADSHNG
FMSRPHLVWQPASSQSFQLRCGKSGHIHDSVTLPLLFLDVCWVSRLRSFSGQRSRKGLMV
LHRVWKFASGSGLSLRMMYESVDVVGLNPSPNPFLMMEYYNQSRGCLIPEKGLVPGAPHP
YSTSIRNQHWNGSNHCSRRLHRRLALSWPTLDCLISLWNGEALEPVPKADTQKAIETQST
SSEEIVPSPPSPPPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHR
EKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKDEKKPECIENYVLSPDTEQ
MINRVRKAHQETFPSLCQLGKYTTTNSSERRVALDVDLWDKFSELSTKCIIKTVEFAKQL
PGFVTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLT
DLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQAEKVDVLQEPLLEALKIYVRRR
RPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLESGASG
SRPSGAPPGSCSPSLSPSSAQSSPPTQSP
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaaaggcaacccagtgccgggcccccacctcaacggcttccctgtgcccgcc
tactcgtatttcttcccccacatgctggggagcctgtcgccgccgggcctgcctggtctt
cccatcagtgggtacagcactccttcaccggccagtaaggccttctctaccgggcaaaga
aatggaattgataccagtgactctccctctcaatcatcagtcaaaaaagaagagataaaa
gcgaggcaggagagggacctctcgtcaagcagctgggcagaggtgagccagagtggagag
aagatcgcaggaattcgccccagtttgaagtatttccagaatgccgatagccataatgga
tttatgagtaggccacacttagtgtggcagcctgcatcttcccaaagtttccagctccgc
tgtgggaaaagtgggcacattcatgactcagtgactttaccgcttttgttcctggatgtg
tgctgggtgagcagactgaggagcttctctgggcagcgctcgaggaaaggcctaatggtg
ctacaccgggtgtggaagttcgcgtccggctctggtctctcgctgcgtatgatgtacgag
agtgtggacgtggtgggactgaaccccagcccgaatccctttttgatgatggaatactac
aaccagagcagaggatgcttgatcccagagaaggggctggtgcccggggcgccccatccc
tacagcacgtccatcaggaaccagcactggaacggctccaaccactgtagcaggaggctc
catcgcaggcttgccctgagctggcctactttggactgtttgatctcattgtggaacggt
gaagcgttggagcctgtgcctaaggcggatacgcagaaggccatagaaacccagagtacc
agctcggaagagatagtgccaagcccgccttcgcctcccccgccgccccgggtctacaag
ccctgctttgtgtgccaggacaagtcctcagggtaccactatggtgtcagtgcctgtgag
ggctgcaagggcttctttcggaggagcatccagaagaacatggtgtacacttgtcaccgg
gagaagaactgcatcatcaacaaggtcacccgcaaccgctgccagtactgtcgactgcag
aagtgcctggaagtgggaatgtccaaggagtctgtgaggaatgaccggaacaagaagaaa
aaggatgagaagaagccggagtgcatagagaactatgtgttgagccctgacaccgagcag
atgatcaacagggttcgcaaggcccatcaggaaaccttcccttctctctgccagctgggc
aaatacactacgacaaacagctcggagcggcgtgtggctttggacgtggacctctgggac
aagttcagtgaactctccaccaagtgtatcataaagacggtggagtttgctaagcagctg
cctggctttgtgaccctcaccatcgcagatcagatcactctcctcaaggccgcctgtctg
gacatcctgatactccggatctgtacgcgctacacgccagaacaggacaccatgacgttc
tcagatggactaacgctaaaccgaacccaaatgcacaacgcgggcttcggtcctcttacc
gacctggtgtttgcctttgcgaaccagctccttcctctggagatggacgatgcagagact
ggactgctcagcgccatctgcctgctgtgtggagatcgtcaggacttggaacaggcggag
aaggtggacgtcctacaggagcctctcctggaggcactgaagatatacgtaaggaggagg
aggcctcacaaaccccacatgttccccaagatgttgatgaagatcactgatctgagaagc
atcagcgctaaaggagccgagcgagtcatcactctgaagatggagatcccaggctccatg
ccccccctcatccaggagatgctggagaactcggaaggtctggagagtggagcctcaggc
agccggcccagcggtgcccccccaggcagctgcagccccagcctgtccccgagctctgcc
caaagcagtccacccacacaatcaccatag
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