Thioalkalivibrio nitratireducens: TVNIR_0419
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Entry
TVNIR_0419 CDS
T02408
Symbol
rsmB_[H]
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tni03009
]
TVNIR_0419 (rsmB_[H])
Enzymes [BR:
tni01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
TVNIR_0419 (rsmB_[H])
Ribosome biogenesis [BR:
tni03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
TVNIR_0419 (rsmB_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltr_RsmF_N
Methyltransf_31
Methyltransf_25
Methyltransf_12
FtsJ
YiiM_3-alpha
Motif
Other DBs
NCBI-ProteinID:
AGA32124
UniProt:
L0DRA7
LinkDB
All DBs
Position
402471..403703
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AA seq
410 aa
AA seq
DB search
MALADETADLPPREAAWVRALAFATVRWYVQLEAMVEGMLDRPLKPRDAVIRVLLCQGLA
EIFRFGTPDHAAVRETAELARAIQRPGAVGLVNALLRRALRERELLGQAMQRTPALRHAC
PAWLVAGIRASYPERWEAVLEASTRAAPMTLRVNTARVSRAAMQERLERAGLAAQPHPLV
PTALTLAEPVDVDAIPGFADGLLSVQDAAAQWAGLLLSPQPGERILDACAAPGGKTGHLL
EASSGGIDLTALDVDGARMGRVRDNLRRLGYRAQLVIGDLADPEDWWDGRPFDAILLDVP
CSATGVIRRHPDIKLLRRAADIPALAARQRELLAQAWRLLRPGGRLLYVTCSLLADENER
VVGSWLAATPDAKPLPLAFPGGDDRPVGRAVALGAEDMDGFYFALLGRAG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctggcggacgaaaccgcggacctgccgccgcgcgaggctgcatgggtccgggcc
ctggcattcgccacggtacgctggtacgtgcagctcgaggcgatggtcgaggggatgctg
gaccggccgctgaaaccgcgcgatgccgtgatccgcgtgctgctgtgccaggggctggcg
gagatcttccgtttcggaaccccggatcacgccgcggtgcgcgagaccgcggaactcgca
cgggccatccagcggccgggtgcggtggggctggtgaacgcgctgctgcgccgcgcgctg
cgcgagcgcgaattgctgggtcaggcgatgcagcgcacgcctgcgctacgccacgcctgc
cccgcctggcttgttgccgggatccgcgccagctacccggagcgctgggaagcggtactg
gaagcttccacccgggcggcgccgatgacgctgcgtgtgaatacggcacgcgtatcccgg
gccgccatgcaggagcggctggaacgggcggggctggcagcgcagccgcatcctctggtt
ccgaccgcgctgacgctggcagagcccgtcgacgtcgacgcgattccggggttcgccgat
gggctgctgtcggtgcaggatgctgccgcccagtgggccgggttgctgctgtcgccgcag
cccggcgaacggatcctggatgcctgcgcggcaccgggtggcaagaccggacacctgctc
gaggcatccagcggtgggatcgacctgaccgcgctcgacgtcgacggtgcgcgaatgggt
cgggtgcgcgacaacctgcggcgcctggggtatcgggcgcaactggtgatcggtgacctg
gcggatccggaggactggtgggatggtcggccgttcgacgcgatcctgctggacgtgccg
tgttcggcaaccggcgtgatccgccgccacccggacatcaagctgctgcgccgggccgca
gacatcccggcgctggccgcgcgccagcgcgaactgctggcgcaggcctggcgcctgctg
cgtccgggcgggcgcctgctgtacgtgacctgctcgctgctggccgacgagaacgagcgg
gtcgtcggttcctggctggccgcgaccccggacgcgaagccgctgccgctggcgtttccc
ggcggggacgatcgcccggtcgggcgcgcggtcgcgctgggcgccgaggacatggacgga
ttctactttgcgctgctcgggcgcgcgggctga
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