Thioalkalivibrio nitratireducens: TVNIR_1257
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Entry
TVNIR_1257 CDS
T02408
Symbol
rnz_[H]
Name
(GenBank) Metal-dependent hydrolases of the beta-lactamase superfamily III
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tni03016
]
TVNIR_1257 (rnz_[H])
Enzymes [BR:
tni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
TVNIR_1257 (rnz_[H])
Transfer RNA biogenesis [BR:
tni03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
TVNIR_1257 (rnz_[H])
Prokaryotic type
TVNIR_1257 (rnz_[H])
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
AGA32930
UniProt:
L0DVD0
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All DBs
Position
1204750..1205769
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AA seq
339 aa
AA seq
DB search
MKPQFQTHLVNGTTGDPVLYVDFLFQRRALLFDLGEIVALSPRQVLRVTDVFVSHTHMDH
FIGFDTMLRLMLGRSKRLRLFGPPDFLDRVAHRLLGYTWNLVHNFAVELVIEAVERWPDG
ELRRARFRSSRAFAREEMPPATASDGVLLDEDDFRVRAVPLDHNGIVSLAFALEEKAHLN
VWKNRLDELGLPTGPWLTELKRRVRRGDADDTALTIRWRDRHGEHQRIEPLGLLRREVLR
EVPGQTIAYVVDAVFHDANRRAIVQLARYADRFYVEAPFLNEAATRAATTGHLTAGQAGR
LAREAGVKRLIPFHFSSRHTGQEALIEEQAMTAFAGGKA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccccagttccagacccacctggtcaacggcaccaccggtgatccggtgctctac
gtcgacttcctgtttcagcgccgtgcgctgctgttcgacctcggcgagatcgtggcgttg
tcgccgcgccaggtgctgcgcgtcaccgatgtgttcgtatcgcacacgcacatggaccat
ttcatcggcttcgacacgatgctgcggctgatgctggggcgttcgaagcgactgcggctt
ttcgggccgccggacttcctggaccgggtcgcgcaccggctgctcggctacacctggaac
ctggtgcacaactttgcggtggaactcgtgatcgaggcggtcgaacggtggccggacggc
gagctgcgccgggcccggttccggtcttcccgcgcattcgcccgtgaggaaatgcctccc
gcaacggcctcggacggcgtactgctcgacgaggacgacttccgggtacgggctgtgcca
ctggatcataacgggatcgtctcgctggcgttcgcgctggaggaaaaggcgcacctgaac
gtctggaagaaccggctggacgaactggggctgccgaccggcccatggctcaccgaactg
aagcggcgagtacgccggggcgacgcagacgacacggcgttgacgatccgctggcgtgac
cgtcacggggagcaccagcggatagagccgttgggcctgttgcgccgcgaggtgctgcgc
gaggtgccgggacagacgatcgcctatgtggtcgacgccgtttttcatgatgccaaccgg
cgcgcgatcgtgcagctcgcccgttacgccgaccggttctatgtcgaggccccgtttctg
aacgaggccgccacacgtgcggcgacgaccggccacctgacggccgggcaggccgggcga
ctggcgcgcgaggcgggggtgaaacggctgatcccgtttcacttctcgtcccggcatacc
gggcaggaggctctgatcgaggaacaggcgatgaccgcattcgccggcggaaaggcttga
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