KEGG   Thioalkalivibrio nitratireducens: TVNIR_2446
Entry
TVNIR_2446        CDS       T02408                                 
Name
(GenBank) CRISPR-associated protein, Csy4 family
  KO
K19130  CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
Organism
tni  Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:tni00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tni02048]
    TVNIR_2446
Prokaryotic defense system [BR:tni02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-F factors
    TVNIR_2446
SSDB
Motif
Pfam: Cas_Csy4
Other DBs
NCBI-ProteinID: AGA34089
UniProt: L0DWW1
LinkDB
Position
complement(2524019..2524579)
AA seq 186 aa
MDHYLDFTVLPDPEFRETTLLGALVSKLHRRLVVLEADDIGISLPDFEKAPPLGNRLRVH
GTQERIETLMQEEWLGGMRGQLEIAPLRAVPAEVLHRGVRRRQYKTNVERLRRRRMRRHG
ETHEEARERIPDTVARKVKTPFLTVYSTSSGQRFSLFIEHEPVQTRCVVGAFNSYGISRE
ATIPWF
NT seq 561 nt   +upstreamnt  +downstreamnt
atggaccactatctggacttcaccgtgcttccagaccccgagttcagagaaaccaccttg
ctcggagcgctggtcagcaagcttcatcgtcggctggtagtcctggaagctgacgatatc
ggcatcagcctccccgattttgaaaaagccccgcctcttgggaaccggttgcgagtccat
ggaacccaagagcgcatcgaaacactgatgcaggaggaatggctgggcggtatgcggggc
caactggaaatcgcccctcttcgcgcggtcccggccgaagtcttacacagaggcgtccgc
cgccgacaatacaagaccaacgtcgaacggcttcgacgacggcgcatgcgccgacacgga
gaaacccacgaagaggcgcgtgagcgtatcccggacaccgttgctcgcaaggtgaagacc
ccgttcctcaccgtgtacagcaccagctccggccagcgtttcagccttttcatcgaacac
gaaccagtacagactcgctgcgtggtgggcgcgttcaacagctacgggatcagccgggaa
gccaccattccgtggttttga

DBGET integrated database retrieval system