Thioalkalivibrio nitratireducens: TVNIR_2690
Help
Entry
TVNIR_2690 CDS
T02408
Symbol
rnd_[H]
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tni03016
]
TVNIR_2690 (rnd_[H])
Enzymes [BR:
tni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TVNIR_2690 (rnd_[H])
Transfer RNA biogenesis [BR:
tni03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TVNIR_2690 (rnd_[H])
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AGA34331
UniProt:
L0E103
LinkDB
All DBs
Position
2778347..2779495
Genome browser
AA seq
382 aa
AA seq
DB search
MHDHGLITTETGLRALLDAIAGSEWVAMDTEFIREKTYFPKLCLIQLATPDHIACVDPLA
LGGIGQLDQLLQDSAVLKVFHAASQDLEVLYLVTGKVASPVFDTQVAASLLGHGEQVGYA
NLVEAVLHRELDKTQSRTDWARRPLQPAQLEYARDDVRFLTELFVQLQKELDALGRLDWL
QPEMEALTRPEQYRPDPARAWLRVSGHKRLKPRDLAVLRELAAWRETEARDLDRPRRWVI
SDDALLTIARTRPADLQTLHAQRGLPRNLDEQRARQILEAVQQGCAAPKESWPAVSRRQP
LSEAEEVVADVCMALLRELARRQKISPQAIASRKDVMALMRREDGATLAQGWRARVAGAQ
LQRWLDGASALRRSSSGIELDR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatcatgggctgatcaccacggagaccggcttgcgcgcactgctcgatgccatt
gccgggagcgagtgggtggcgatggacaccgagttcatccgcgaaaaaacgtactttccg
aaactctgcctgatccagctcgcgacccccgatcacatcgcctgcgtcgatccgctcgca
ctcggcggtatcgggcagctggaccaactgctgcaagactcggcggtactcaaggttttt
cacgcagccagccaggatctcgaagtcctttacctcgtcaccggcaaggtggcatccccg
gtcttcgatacccaggtggccgcgagcctgctggggcacggggaacaggtaggctatgcc
aatctggtggaggccgtgctgcaccgcgaactcgacaagacccagtcacgcacggactgg
gcgcggcgcccgctgcagcccgcgcaactcgaatatgcgcgtgatgatgtgcgtttcctc
acggaattgttcgtgcagttgcaaaaggaactcgacgcgcttggccgactggactggctg
cagccggaaatggaggcattgacccggcccgaacagtaccggcccgatccggcccgggcc
tggctccgggtcagcgggcacaagcgactcaagccgcgggatctggcggtgctgcgcgaa
ctcgcggcctggcgcgaaaccgaagcgcgggacctggaccgcccccgccgctgggtgatc
agcgacgacgctctgctgaccatcgcgcgcacacgccccgcggatcttcagaccctgcac
gcccagcgcgggctgccgaggaatctggacgagcagcgggcccggcagatcctggaggcc
gttcagcagggctgcgcggcaccgaaggagagctggcctgcggtctcacgaaggcaaccg
ttgagcgaggccgaggaagtcgtggccgacgtctgcatggcgctgctgcgcgaactcgcg
cgccggcagaagatcagcccccaagccatcgcgagccgcaaggacgtaatggcactgatg
cgcagggaagacggcgccacgctggcgcagggatggcgggcacgcgtcgccggggcccag
ctgcagcgctggctggacggcgccagcgcactgcgccgcagttcatcgggaatcgaactg
gaccgatga
DBGET
integrated database retrieval system
