KEGG   Thioalkalivibrio nitratireducens: TVNIR_2965
Entry
TVNIR_2965        CDS       T02408                                 
Symbol
yoaA_[H]
Name
(GenBank) DinG family ATP-dependent helicase YoaA
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
tni  Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:tni00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tni03400]
    TVNIR_2965 (yoaA_[H])
Enzymes [BR:tni01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     TVNIR_2965 (yoaA_[H])
DNA repair and recombination proteins [BR:tni03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    TVNIR_2965 (yoaA_[H])
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Glyco_tran_10_N
Other DBs
NCBI-ProteinID: AGA34602
UniProt: L0E028
LinkDB
Position
complement(3057212..3059161)
AA seq 649 aa
MPERARDALRPEGILARAVPGFQPRAQQQVMAAVVAEVLEQAPSALLVEAATGVGKTYAY
LVAALLSQRRILISTGTKTLQDQLYDKDLPVVCQALGRHPKTALLKGRSNYLCHYRLDAA
AGDGAGGRHALTLEALRRYARRSPDGDLTQADILAENAPLWSQVTSTVDNCLGHECPQLN
ECFVLRARRRAQDADVIVVNHHLLLADMALKDEGFGELLPQVDAVIVDEAHQLPEIAGAF
FGLALGTRALRDLGRDIVRDFEREAPELADLREPVASLQEAVAGLLECSGDWPARAAWSE
VSGGPEVEAALSRLDEALDRLGNDLAEVAGRTPGLDQARVRCLTLRSRLHEWLAEDTETV
AWVERFRQSLILHRTPLDAARPLAKRRAACPASWVFTSATLAIGDDFGHAARRLGLPADV
RTERLDSPFDFSRQACLVLPERPLPNPNSPGYTRACIDWAWPLVEGSPGGGFFLFTSHRA
LQEAAGLLRDRLPPGHPLLVQGEQPRAELLVRFRASGQAWLLGAQSFWEGVDIRGDALST
VIIDRLPFAAPNDPVLQARAAAIEAAGGTAFMDFQLPQAVLALKQGAGRLIRDAQDSGIL
ALCDPRILQKPYGRRFFDGLPAFHQTRDPQQALAFLRGARERREPVTCA
NT seq 1950 nt   +upstreamnt  +downstreamnt
atgcccgaacgggcgcgcgacgcgctgcggcccgagggcatcctggcccgcgccgtccct
ggtttccagccgcgggcgcagcagcaggtcatggccgcggtcgtcgcggaggtgctggaa
caggccccgtccgcgctgctggtcgaggcagccacgggcgtgggcaagacctacgcctat
ctggtagcggcgctgctatcgcagcggcggatcctgatctccacgggtaccaagaccctg
caggaccagctgtacgacaaggatctgccggtcgtctgccaggcgctgggccgccacccg
aagaccgcccttctgaaaggacgttcgaactacctgtgccactatcgcctcgacgcggcg
gccggcgacggcgctggcggccggcacgcgctgactctcgaggcgctgcggcgctatgcg
cgccgctcgcccgacggcgacctgacccaggccgacatcctggccgagaatgccccgcta
tggtcccaggtgacgtcgacggtcgacaattgcttggggcacgagtgtccgcaactgaac
gagtgcttcgtcctgcgcgcgcggcggcgcgcgcaggatgccgacgtgatcgtggtgaac
catcacctgctgctggcggacatggcgctgaaggacgagggcttcggggagttgctgccg
caggtcgatgccgtgatcgtggacgaggcgcatcagctgccggaaatcgccggggccttt
ttcggactggcgctgggtacgcgggcgctgcgcgacctgggccgggacatcgttcgcgac
ttcgagcgcgaggcaccggagctggccgatctgcgcgaaccggtggcgtcgctgcaggag
gcggtcgcgggcctgcttgaatgctccggggactggccggcacgggcggcctggagcgag
gtgtccggcggccccgaagtggaggcggcgctgtcacggctcgacgaggccctggatcgg
ctcgggaacgatctcgccgaggtcgcggggcgtacgcccggcctcgaccaggcgcgggtg
cggtgcctgaccctgcgatcccgtctgcacgaatggctcgcggaggacaccgaaaccgtt
gcctgggtggaacggttccgacagagcctgatcctgcaccggacacccctggacgccgcg
cggcctctggcgaagcggcgcgcggcctgcccggccagctgggtgttcacctctgcgacg
ctcgcgatcggagacgacttcgggcatgcggcccgacgcctggggttgccggcggacgtg
cgcaccgagcgtctggacagccccttcgacttctcccgccaggcctgcctggtgctgccg
gagcggccgttgccaaatccgaacagccctgggtatacccgggcctgcatcgactgggcc
tggccgctggtcgagggcagcccgggcggcggtttcttcctgttcaccagccatcgcgcg
ctgcaggaggcggctggcttgctccgtgaccggctgccgcccggacatccgctgctggtg
cagggcgagcagccgcgggccgaactgctggtgcgtttccgagcgtccggtcaggcctgg
ctgctcggtgcgcagagtttctgggagggagtcgatatccgcggcgacgcattgtcgacg
gtcatcatcgaccggctgcctttcgcggcgccgaacgacccggtgctgcaggcccgggct
gcagcgatcgaggcggcgggggggactgcgttcatggatttccagttgccccaggccgtg
ctggcactgaaacagggtgcggggcggctgatccgcgacgcgcaggattccgggatcttg
gcgctgtgcgatccgcgtatcctccagaagccctatggccgccgtttcttcgacgggctt
ccggcgttccaccagacccgggatccgcagcaggcgctggcgttcctgcgcggcgcgcgg
gaacgcagggagccggtcacatgcgcctga

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