Thioalkalivibrio nitratireducens: TVNIR_3813
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Entry
TVNIR_3813 CDS
T02408
Symbol
recF_[H]
Name
(GenBank) DNA recombination and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TVNIR_3813 (recF_[H])
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tni03400
]
TVNIR_3813 (recF_[H])
DNA repair and recombination proteins [BR:
tni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TVNIR_3813 (recF_[H])
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Ortholog
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_27
ABC_tran
AAA_13
AAA_16
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGA35439
UniProt:
L0E0T7
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Position
3952364..3953464
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AA seq
366 aa
AA seq
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MLVELWTRDVRNLQETRIRFGNELNLIVGANGSGKTSLLEACHVLALGRSFRTHRLARVA
RSGFGAFSVAGELWDSIHGRSWAGVEWKGQRRSRLNGQWLEGHWEIARRMPLLSVHAGSF
ELLAGAPEERRRLLDWGSFYLHADFVQQWMTWRRAHEQRNAALRQQDTRTAARFEAIAAD
AGTRLTEMRAAVVAQLRHHLADAASCGLRQGLAGAIELTFRQGWPENETLSDAYARSRSS
DLERGFGQSGPQKADLEIRVGGRLIREASRGEQKRVLNVLVIAQGLLLVGIGPGGAAPLL
LLDDAVAEMDEAGLGGLMDAIAVLQWQCLATTVDLKWALRTASRYRGAEMFHVKQGTLLR
SHVPGD
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgttggtcgaactctggacgcgggacgtgcggaatctgcaggaaacccgtatccggttc
ggcaacgaactcaacctgatcgtcggtgccaatggctcggggaagacctcgctgctcgag
gcgtgtcacgtgctggcactcgggcggtcgttccgtacccatcgcctggcgcgcgtcgcc
cggagcgggtttggggcattctcggtcgcgggcgagctatgggattccatacacggccga
tcgtgggccggcgtggaatggaaggggcaacgtcggtcacgtttgaacggacaatggctc
gagggccattgggagatcgccaggcggatgccgctcctgagcgtccacgccgggtcgttc
gaactccttgccggtgccccggaagagcggcggcggttgctggactgggggagtttctat
ctgcatgcagacttcgtgcagcagtggatgacctggcgtcgcgcccatgaacagcgcaat
gcggcgctgcgacaacaggacacacggacggcggcacgtttcgaggcgatcgctgccgac
gcaggaacccgcttgaccgaaatgcgagcggcagtggtcgcgcaactgcggcaccacctt
gcggatgcggcgagctgcggactccggcaggggctggccggagcgatcgaactgacgttc
cgacaagggtggccggagaacgaaacactgagcgatgcgtatgcccgttcgcggtcgagt
gacttggagcgtgggttcggtcagtcagggccacagaaggccgacctcgaaatccgggtg
ggcgggcgcctgatccgtgaggcgtcgcggggagagcagaagcgggtactgaatgtgctg
gtgattgcccaggggctgttgctggtcgggatcggtcccgggggggctgcaccattgctg
ttgctggacgacgcggtggccgagatggacgaggcgggcctgggcggtctgatggatgcg
atcgccgtgcttcagtggcaatgcctggcaaccacggtggatctgaaatgggcgttgcga
accgcgagccggtatcgcggcgcggagatgtttcacgtgaaacagggcacgctgctgcga
tcacacgtgccaggcgactga
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