Trichoplusia ni (cabbage looper): 113494462
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Entry
113494462 CDS
T05757
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113494462
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113494462
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
Pre-60S particles
Helicases
113494462
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
SBF_like
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
113494462
NCBI-ProteinID:
XP_026728611
UniProt:
A0A7E5VK78
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Position
1:complement(11250510..11253994)
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AA seq
596 aa
AA seq
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MVIKDWDKVKPKLSEPVLSCVRKQGFVAMTPIQAAVIPLIMSCKDVVAEAVTGSGKTLAF
VVPMIEMLLKKQKDSPLRKDFIYAVIISPTRELATQIYKVIELFLQEPELSPVHVALLVG
GRPVEADVETLQKGAHIAVCTPGRLQDLLAERKQLNLAGRLKELDILVLDEADRLLDLGF
SSTLTTILQYLPRQRRTGLFSATQTKELQDLVRAGLRNPVVVSVKEKSTISTPLLLENYY
VIVEPEDKFLFLLNFIRNRKIAKGLFFLPSCACVDYWADVLPVFLPDIKIFSIHGKMKLK
RSKILEKFRAADNTILLCTDLLARGLDIPEVEWVLQWEPPTNPAALVHRVGRTARGGAAG
CSLLPLLPTEDTYVPFIKTNQMVELKDWKQSKDEIKISPKLKEKVLSMLHEQQKSDRAVL
DKGQRAFVSHMRAYSKHECNLLLQFKELPLGHIATSYGLLKLPLMPEIKQEHKDQFVGPK
EQIDFNSIPYKDKQKEASRLQKLEEYKKSGVWPSKKKKKMIQSQPWEQAKQNKEERKLKR
KKRKELKKNEPEGGKKRKGRTVTQEELNELAADIALMKKLKKRKITQDQFDQQFEG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggtgattaaagattgggataaggtgaagccaaagctttcagagcccgtgttatcctgt
gttaggaagcagggtttcgtagctatgactcctatacaagcagcggtaattccgttaatc
atgtcgtgtaaggatgtggtggccgaggcggttaccgggtccggtaagacgctggctttc
gttgtaccgatgatagaaatgttgttgaagaagcaaaaggactcgcccttgaggaaagac
ttcatttatgctgttattatatcacctactagagaactggccacacagatttataaggtc
atagaattgttcctgcaagagccagaattgtctcctgtccatgttgctctcctggttggt
ggcagaccagtggaggcggatgttgagaccctgcagaagggagctcacatagctgtgtgc
actcccggccgactgcaagacttgctggctgagagaaagcagctcaacctggcaggccgg
ctaaaagaactggatatcctagtacttgacgaagctgaccgcctcctagacttaggcttc
agttcaacactgaccaccatcctccagtacctcccgcgccagcgccgcaccggcctgttc
tccgccacacagaccaaagaactccaggacctagtcagggccggcctgaggaaccctgtc
gtagtcagcgtcaaagaaaaatcgaccataagcactccattacttctagagaactactat
gtaattgttgaaccagaggacaaattcctattccttctaaattttataagaaataggaaa
attgcaaagggtctgttctttttaccgtcgtgcgcatgcgtcgattattgggcggacgtg
ttgccagtgttcttgccagatataaaaatattttcgattcatgggaaaatgaagctgaaa
agaagtaagattttggagaagttcagagcagccgataacacgatactgttgtgtacggat
ttactggcgagaggtttagacatccccgaagtagaatgggtgttacaatgggagccgccg
acgaacccggccgccctggtccaccgcgtgggccgcactgcgcggggcggcgcggccggc
tgctcgctactgccgctgctgcccaccgaggacacctacgtacccttcatcaagaccaac
cagatggtcgagctcaaagactggaagcagtccaaggatgagatcaagatcagtccgaaa
ttgaaggagaaagtcttatcaatgctgcatgaacaacaaaagagtgacagagcagtttta
gacaaaggtcaacgcgctttcgtctcccacatgcgggcctactcgaaacacgaatgcaat
ctcctcttacaattcaaagagctacccttaggtcacatagcaacaagctacggcctgttg
aagcttcccttaatgccagaaataaagcaagaacataaggaccagtttgtgggaccgaag
gaacagattgattttaacagcataccttataaagataaacagaaagaagcaagtaggctg
cagaagttggaggagtacaagaagagtggtgtctggccgtcgaagaagaaaaagaaaatg
atacaatctcaaccatgggaacaagcaaagcagaacaaagaggagcgtaaactaaaaagg
aagaaacgaaaagaattgaaaaagaacgagccagaaggagggaagaagagaaaaggcaga
acggtaacacaagaagagttgaacgaattggcagcagacatcgcactcatgaagaaacta
aagaaacggaagattacacaggaccagtttgatcaacagttcgaaggatag
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